Transcript Information: S_Transcript_58645.p1


Annotated TAIR IDAT1G18870.1
Annotated Gene Nameisochorismate synthase 2
Annotated Gene Symbol(s)ICS2, ATICS2
Annotation TypeOrtholog
Chromosome Positionchr1:6515486-6519176 | Forward length=562
E-Value1.3E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.566936530041
Replicate 239.827633097332
Replicate 345.188695339039
Condition 2: 8 Hour
Replicate 112.093619617075
Replicate 211.040652575449
Replicate 312.088207949145
Condition 3: 24 Hour
Replicate 146.905031217899
Replicate 240.520147969833
Replicate 348.369548361327


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58645.p1 GENE.S_Transcript_58645~~S_Transcript_58645.p1 ORF type:3prime_partial len:231 (+),score=47.34,Chorismate_bind|PF00425.14|1.1e-23 S_Transcript_58645:2409-3098(+)
ATGGTTCCTCAGGTTGAGTTTGATGAGCTTGAAGGTAAATCCTTGCTGGCTGCTAATGTTGCATGGGACGATTCCCTTTCATGCTCTTGGGAAATGGCAATTGAATCCTTTCAAGCTAAATTAGACCAGGTCACATATGTTATTAAGAAGTTGGAGAAAGATGCCCATAAAACATCCATTACTGGCAATATTCTCCATGTCCCCAGTGAGACAGATTGGGATAGTGCTGTTAAGAAAGCAGTGCATATGATCAGAAGAAGCCGCTCAACACTAACTAAGGTTGTACTTGCACGTAGCAGCAGAATATTTACTGCCTCTGATATAGATCCGGTTGCATGGTTAGCTTGTTTACAGGTGGAGGGGGATAATGCTTACCAGTTCTTGCTTCAGCCACCTAATGCGCCAGCTTTCATCGGAAACACTCCAGAGCAGCTCTTTTACCGGAAGAACTTGAGTATTTGGAGTGAAGCTTTGGCTGGAACCCGAGCAAGATATGGATCAAGGACCTTAGATCACGCAACAGGACTTGATCTTCTCTCCAGCCCCAAAGATGACTTAGAGTTTACAATTGTTCGAGAGTGCATAAGAAAGAAGCTTGAGGCTGTATGTAACTCAGTACTAGTTGATCCCAAGAAGGCAATCCGAAAGCTTCCACGAGTCCAGCATTTGTATGCTCAATTAAAAGGCAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58645.p1 GENE.S_Transcript_58645~~S_Transcript_58645.p1 ORF type:3prime_partial len:231 (+),score=47.34,Chorismate_bind|PF00425.14|1.1e-23 S_Transcript_58645:2409-3098(+)
MVPQVEFDELEGKSLLAANVAWDDSLSCSWEMAIESFQAKLDQVTYVIKKLEKDAHKTSITGNILHVPSETDWDSAVKKAVHMIRRSRSTLTKVVLARSSRIFTASDIDPVAWLACLQVEGDNAYQFLLQPPNAPAFIGNTPEQLFYRKNLSIWSEALAGTRARYGSRTLDHATGLDLLSSPKDDLEFTIVRECIRKKLEAVCNSVLVDPKKAIRKLPRVQHLYAQLKGR

Click here to download the sequence:
Link to NCBI Protein BLAST