Transcript Information: S_Transcript_5872.p1


Annotated TAIR IDAT5G52650.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21355781-21357003 | Reverse length=179
E-Value3E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1106.74285741324
Replicate 294.279242808615
Replicate 397.353459326547
Condition 2: 8 Hour
Replicate 191.594299394899
Replicate 288.142638629743
Replicate 386.311710793941
Condition 3: 24 Hour
Replicate 167.325214692323
Replicate 273.688349114353
Replicate 381.041323006602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5872.p1 GENE.S_Transcript_5872~~S_Transcript_5872.p1 ORF type:internal len:183 (+),score=41.22,S10_plectin|PF03501.11|4.3e-44 S_Transcript_5872:3-548(+)
CGGGAGTCTCTCACTGGAAGCTGCTGCACCAAGACTTTGACGCCTCTTTCTGGTTTCAGCTTCCTCCCGCAAAGAGCAGCCATGATTATCCCAGAGAAGAACCGTAAGGAGATTTGTAAGTACCTCTTCCAAGAGGGTGTGTGCTATGCGAAGAAGGACTTCAACCTTGCTAAGCACCCGGACATTGATGTTCCGAACTTGCAAGTGATTAAGCTCATGCAGAGCTTCAAGTCAAAGGAATATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACTAACGATGGCATTGAGTTCTTGAGGACTTACCTCAACCTCCCATCCGAAATTGTGCCTGCTACCTTGAAGAAGCAGATGAAGCCCCCAGGTCGCCCCATGGGACCTTCTGGTGACCGTCCACGTGGCCCACCCAGATTCGAAGGGGACAGGCCAAGATTTGGTGACCGTGAAGGTTACCGTGCTGGTCCTCGTGGACCACCAGGTGAATTCGGTGGTGAGAAGGGAGGAGCCCCAGCTGACTACCAGCCATCATTCAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5872.p1 GENE.S_Transcript_5872~~S_Transcript_5872.p1 ORF type:internal len:183 (+),score=41.22,S10_plectin|PF03501.11|4.3e-44 S_Transcript_5872:3-548(+)
RESLTGSCCTKTLTPLSGFSFLPQRAAMIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPPGRPMGPSGDRPRGPPRFEGDRPRFGDREGYRAGPRGPPGEFGGEKGGAPADYQPSFS

Click here to download the sequence:
Link to NCBI Protein BLAST