Transcript Information: S_Transcript_5873.p1


Annotated TAIR IDAT4G25740.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13107488-13108751 | Reverse length=177
E-Value1.3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1246.49145281964
Replicate 2197.34784866274
Replicate 3181.8835351693
Condition 2: 8 Hour
Replicate 1173.83869899897
Replicate 2166.63170021314
Replicate 3154.20913198362
Condition 3: 24 Hour
Replicate 1128.80948541006
Replicate 2139.10891243413
Replicate 3132.19830170957


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5873.p1 GENE.S_Transcript_5873~~S_Transcript_5873.p1 ORF type:5prime_partial len:145 (+),score=44.61,S10_plectin|PF03501.11|2.8e-26 S_Transcript_5873:1-435(+)
CTGCAAGTGATTAAGCTTATGCAGAGCTTCAAGTCAAAGGAGTATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACTAACGATGGCATTGAGTTCTTGAGGACTTACCTCAACCTCCCATCCGAAATTGTGCCTGCTACCTTGAAGAAGCAGATGAAGCCCCCAGGTCGCCCCATGGGACCTTCTGGTGACCGTCCACGTGGCCCACCCAGATTCGAAGGGGACAGGCCAAGATTTGGTGACCGTGAAGGTTACCGTGCTGGTCCTCGTGGACCACCAGGTGAATTCGGTGGTGAGAAGGGAGGAGCCCCAGCTGACTACCAGCCATCATTCAGTGGTGCTGGCAGAAGGCCTGGCTTTGGTCGTGGTGCTGGAGGTTTTGGTGGTGGATCTGGGAGTGGTGCCTCAGGAGGTTTTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5873.p1 GENE.S_Transcript_5873~~S_Transcript_5873.p1 ORF type:5prime_partial len:145 (+),score=44.61,S10_plectin|PF03501.11|2.8e-26 S_Transcript_5873:1-435(+)
LQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPPGRPMGPSGDRPRGPPRFEGDRPRFGDREGYRAGPRGPPGEFGGEKGGAPADYQPSFSGAGRRPGFGRGAGGFGGGSGSGASGGFA*

Click here to download the sequence:
Link to NCBI Protein BLAST