Transcript Information: S_Transcript_5877.p1


Annotated TAIR IDAT5G52650.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21355781-21357003 | Reverse length=179
E-Value1.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24415597463468
Replicate 22.8337527872037
Replicate 31.1843958952771
Condition 2: 8 Hour
Replicate 10.58693734817797
Replicate 20.20524631779566
Replicate 30.78223293963234
Condition 3: 24 Hour
Replicate 10
Replicate 20.62377463054167
Replicate 30.92557961119692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5877.p1 GENE.S_Transcript_5877~~S_Transcript_5877.p1 ORF type:5prime_partial len:109 (+),score=22.15,S10_plectin|PF03501.11|2.4e-18 S_Transcript_5877:1-327(+)
TATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACTAACGATGGCATTGAGTTCTTGAGGACTTACCTCAACCTCCCATCCGAAATTGTGCCTGCTACCTTGAAGAAGCAGATGAAGCCCCCAGGTCGCCCCATGGGACCTTCTGGTGACCGTCCACGTGGCCCACCCAGATTCGAAGGGGACAGGCCAAGATTTGGTGACCGTGAAGGTTACCGTGCTGGTCCTCGTGGACCACCAGGTGAATTCGGTGGTGAGAAGGGAGGAGCCCCAGCTGACTACCAGCCATCATTCAGTGTAAGTTACTTAGACTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5877.p1 GENE.S_Transcript_5877~~S_Transcript_5877.p1 ORF type:5prime_partial len:109 (+),score=22.15,S10_plectin|PF03501.11|2.4e-18 S_Transcript_5877:1-327(+)
YVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPPGRPMGPSGDRPRGPPRFEGDRPRFGDREGYRAGPRGPPGEFGGEKGGAPADYQPSFSVSYLDC*

Click here to download the sequence:
Link to NCBI Protein BLAST