Transcript Information: S_Transcript_58806.p1


Annotated TAIR IDAT2G01440.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:193950-199056 | Reverse length=973
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.317865029536
Replicate 213.822470566154
Replicate 313.998703292372
Condition 2: 8 Hour
Replicate 115.73711032439
Replicate 214.240714897175
Replicate 314.574389778105
Condition 3: 24 Hour
Replicate 115.308964534573
Replicate 213.766672694468
Replicate 313.396045672998


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58806.p1 GENE.S_Transcript_58806~~S_Transcript_58806.p1 ORF type:complete len:996 (+),score=197.88,Helicase_C|PF00271.27|22,Helicase_C|PF00271.27|1.9e-17,DEAD|PF00270.25|5.8e+03,DEAD|PF00270.25|4.7e-14 S_Transcript_58806:198-3185(+)
ATGGAACGGTTTGTCTCTTCTCTGCAACCTTGTGCAAAGAATTTGGTTGCAAGCGGTTTGAGAACTGCAATAGCCTTTGAGGCTGAAGCAGGTTATCAGAATTCTTGGAGAAGAAACATGAGATTTAATCAGTTCCTGGTTTCTAAGATATCGAAACTATGTTATAGATCAAAGCATAGGCTGGCAGAAAAGGTGCTTGAGGAAGCGGACAACTATGGTGCTGCGAGCATCTCAGACCGCTCAAAGCTTCTTGAAAAGGTATCTGTTATGTTGGGATATAGTAACCTTGCTGAGTTAGTTGATAATCAAAGAAATCAACTAGAAGCTGGTTTGGTTGTGGAAGATCAGATGGATGCTTTGAGTGTCTCTTTAGCTTGCAGACAATTTTCATCAATCACTTTGGGGAGTTCACCCCTAGTGGAACTGTATACTGGTTCAGCTTGGTATTCTCAAATAAAGACCTACTCTGCAGCTCTTACTTCTGAAGAATTTCAGCCTATCTTGGCAGATGGAAAATGGATGGTTCCAGAGAATCTGACAGAAAGCTGTTCCTTTTATCCTTCCTCTCCAAACACAAGTTTCTCTGTTAGGACAGATGAAGATTTACCTTCACCATTTGAATCTCAATCTGACGATCTGCAAGCCGAGCAATTAGGTCTTTCAATTGTTGAAAATTCTCCTCCCCGTTCACCGCTGGAAGATGAAAAGTTAAATGAATTGATGCTGGACATGCCTATCAGCAGTATACGTGGATTGAGCAAAAGGCGCTGTCGCCAACTGGAAGATTGCGGTTTCTATACGGTCCGCAAATTATTGCACCACTTTCCTCGCACCTATGCTGATTTGCAGAACTCACATTTTGGCATTGAAGATGGCCAATACTTGATTTTTGTAGGAAGGATCTTATCTTCTAGGGCTGTTAAGGCTAGCTATTCCCTTTCATTTCTCGAGGTGATTGTGCGTGTTGAGATTATTGATCGTATGGCAAAATCTGAAGTTGAATCAGATGACACATGCAGTGAAGGAAAGAAAATACTTCACTTGCATTTGAAGAAATTTTTTCGTGGCACTCGTTTCACTAGTCAAGGTTTTCTCAGATGTCTCAAGAATAAGCATATAGAAGGTGATATTGTATGTGTTAGTGGCAAGGTGAGGAGTACCTCTAAGGAAGACCACTATGAAATGAGAGAGTATAGCTTTGATGTGATTGAAAATGAAGAGGATTCATCTGTTCTAGAAAAGGGCAAGCCGTATCCTATATATCCATCGAAAGGTGTACTCAAGCCAGAGTTCTTCAGGGAAATTATCATAAGATCTTTGCGGTCATTGGCTATTAATGTTGACCCTATTTCTGAAGACATCACACGAGATATTGGACTTCTGCACCTCCATGATGCATATGTTGGGATTCATCAACCTAAGGATATAAATCATGCAGATTCTTCTCGGAAACGATTTGTATTTGACGAATTCTTTTATCTTCAGTTGGGACGTTTGTACCAAATGCTTGAAGGTCTTGGATCAAGGCTAGAGAAAGAAGGATTGTTGGATAAATACAGAAATATAGGGCAGCATTCTATTTTAATTGAGGATTGGTCTGATCTCACTAAGAGATTTTTCAGAGGACTACCATATGCGCTGACAAAGAGTCAACTAAGTGCAGTGTCAGAGATTATTTGGGACCTAAAACGACCCGTTCCTATGAATCGGCTTCTTCAGGGAGATGTTGGTTGTGGAAAAACAGTAGTGGCTTTTCTGGCATGCATGGAAGTCATTGGTTCTGGATTCCAGGCTGCGTACATGGTTCCAACTGAACTACTTGCTATCCAGCATTACAAACATTTGAGTGACCTCTTAGAGACTGTGCAGTCTGACCGCAAACCTTCCATAGCCCTCCTGACGGGCTCAACTCCTGCAAAACAAGCACGGATGATCCGCAATGATCTCCAAACAGGGAGTATATCTTTGGTCATTGGAACACATAGTTTGATAGCTGAAAGTGTGGAATTTTCAGCTTTGCGACTTGCAGTGATAGATGAGCAACATCGTTTTGGTGTCATCCAAAGAGGAAGGTTCAATAGTAAGTTATGGTATGCTTCCTCTGGAATCAGGGCAACTTCACTTGGGGGCTCTCCAAAAGATGAGAACCAGATGGCTCCACATGTTCTTGCTATGTCTGCCACTCCAATCCCGAGGAGTCTTGCTTTGGCTCTATATGGAGACATGTCTTTAACACAGATAACAGATTTACCTCCTGGGAGATTGCCTATTGAGACAAATATTATTGAAGGGAATCAGGAAGGGTTTGAGAAGGTTTATGAGATGATGCATCGTGAACTGGAAACGGGTGGAAAAGTGTATCTTGTATACCCAATTATTGAGCAGTCTGAGCAACTACCTGAGCTCCGTTCTGCTTCAGGAGATTTTGAGACTATATGTTCCAGGTTCCCATGTTACAGCTGTGGTTTATTACATGGAAAAATGAAGAGTGATGAAAAAGATGAAGCATTAAGACGATTTAAGGATGGAGAAACTCCAATTCTTCTCGCTACTCAAGTAATTGAGATAGGGGTCGATGTGCCAGATGCATCAATGATGGTTGTAATGAATGCCGAGAGATTTGGGATGGCACAGCTACACCAACTTCGAGGACGAGTTGGTCGTGGTGCTAGGAAATCCAAGTGTCTGCTTGTGGCATCAAGTGCAAGCAGTATGAGCCGCTTGAAGGTGTTGGAACACTCATCAGATGGATTTCATCTGGCAAAGGTTGACCTGCTTCTTCGTGGACCTGGTGACTTGCTGGGTAAGAAGCAGTCAGGACATCTTCCGGAATTTCCTATTGCTCGACTGGAGGTTGATGGATCTATTATACAAGATGCCCATATTGCTGCACTGCGAATACTTAGCTCCTCACATGATCTCGAGCAGTACCCATTACTTAAAGCCGAGCTTAGCATGCGACAGCCTTTGTCTCTTCTTGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58806.p1 GENE.S_Transcript_58806~~S_Transcript_58806.p1 ORF type:complete len:996 (+),score=197.88,Helicase_C|PF00271.27|22,Helicase_C|PF00271.27|1.9e-17,DEAD|PF00270.25|5.8e+03,DEAD|PF00270.25|4.7e-14 S_Transcript_58806:198-3185(+)
MERFVSSLQPCAKNLVASGLRTAIAFEAEAGYQNSWRRNMRFNQFLVSKISKLCYRSKHRLAEKVLEEADNYGAASISDRSKLLEKVSVMLGYSNLAELVDNQRNQLEAGLVVEDQMDALSVSLACRQFSSITLGSSPLVELYTGSAWYSQIKTYSAALTSEEFQPILADGKWMVPENLTESCSFYPSSPNTSFSVRTDEDLPSPFESQSDDLQAEQLGLSIVENSPPRSPLEDEKLNELMLDMPISSIRGLSKRRCRQLEDCGFYTVRKLLHHFPRTYADLQNSHFGIEDGQYLIFVGRILSSRAVKASYSLSFLEVIVRVEIIDRMAKSEVESDDTCSEGKKILHLHLKKFFRGTRFTSQGFLRCLKNKHIEGDIVCVSGKVRSTSKEDHYEMREYSFDVIENEEDSSVLEKGKPYPIYPSKGVLKPEFFREIIIRSLRSLAINVDPISEDITRDIGLLHLHDAYVGIHQPKDINHADSSRKRFVFDEFFYLQLGRLYQMLEGLGSRLEKEGLLDKYRNIGQHSILIEDWSDLTKRFFRGLPYALTKSQLSAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGFQAAYMVPTELLAIQHYKHLSDLLETVQSDRKPSIALLTGSTPAKQARMIRNDLQTGSISLVIGTHSLIAESVEFSALRLAVIDEQHRFGVIQRGRFNSKLWYASSGIRATSLGGSPKDENQMAPHVLAMSATPIPRSLALALYGDMSLTQITDLPPGRLPIETNIIEGNQEGFEKVYEMMHRELETGGKVYLVYPIIEQSEQLPELRSASGDFETICSRFPCYSCGLLHGKMKSDEKDEALRRFKDGETPILLATQVIEIGVDVPDASMMVVMNAERFGMAQLHQLRGRVGRGARKSKCLLVASSASSMSRLKVLEHSSDGFHLAKVDLLLRGPGDLLGKKQSGHLPEFPIARLEVDGSIIQDAHIAALRILSSSHDLEQYPLLKAELSMRQPLSLLGD*

Click here to download the sequence:
Link to NCBI Protein BLAST