Transcript Information: S_Transcript_5889.p2


Annotated TAIR IDAT5G20935.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7103487-7103945 | Forward length=108
E-Value3.9E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1272.73168707681
Replicate 2273.30494351092
Replicate 3275.7832395757
Condition 2: 8 Hour
Replicate 1189.77944251216
Replicate 2178.97478911781
Replicate 3157.80336792835
Condition 3: 24 Hour
Replicate 1288.72501047646
Replicate 2264.41113505739
Replicate 3276.66040955999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5889.p2 GENE.S_Transcript_5889~~S_Transcript_5889.p2 ORF type:complete len:129 (+),score=25.00,DUF3148|PF11347.4|3.2e+03,DUF3148|PF11347.4|3.9e-25 S_Transcript_5889:98-484(+)
ATGTCACTCTCCCTATCTAGCATCATATCTAAGCCATTTTCAAGTCCCCAAAACACTTTGAGTTCAACAACACTGCTTCCCATCACCCAAATCCGAAACCGAGGTCTGGTGATCAAGTGTGAATTGAATGACCAAGCATCAACAAGCAGCAGCAATGGTTCTCTGAAGCTAGGAATAGGCTCCCCTGTTATCATCACTGAAGCTCCCAAAATGATCAAGACTGCTGCTTCGGTCCCTTGCCTTAGGGTCAATGCCGACTTGGTCAAGGCTGGTGATGTTGGAAGGATTGTATCTAGAAAACCCATGGATGTCTGGGCTGTTCGCTTGAGGCTTGGGACATATCTCATAGACCGAAAATACTTCAAGCCATTAGAATTGGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5889.p2 GENE.S_Transcript_5889~~S_Transcript_5889.p2 ORF type:complete len:129 (+),score=25.00,DUF3148|PF11347.4|3.2e+03,DUF3148|PF11347.4|3.9e-25 S_Transcript_5889:98-484(+)
MSLSLSSIISKPFSSPQNTLSSTTLLPITQIRNRGLVIKCELNDQASTSSSNGSLKLGIGSPVIITEAPKMIKTAASVPCLRVNADLVKAGDVGRIVSRKPMDVWAVRLRLGTYLIDRKYFKPLELDE*

Click here to download the sequence:
Link to NCBI Protein BLAST