Transcript Information: S_Transcript_58908.p2


Annotated TAIR IDAT4G35310.1
Annotated Gene Namecalmodulin-domain protein kinase 5
Annotated Gene Symbol(s)CPK5, ATCPK5
Annotation TypeOrtholog
Chromosome Positionchr4:16802436-16804628 | Forward length=556
E-Value2.8E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.704852860653
Replicate 228.614185583327
Replicate 314.818617639225
Condition 2: 8 Hour
Replicate 119.649158763821
Replicate 220.124894409536
Replicate 325.318386674912
Condition 3: 24 Hour
Replicate 112.496418066672
Replicate 214.845291425555
Replicate 312.225532440908


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58908.p2 GENE.S_Transcript_58908~~S_Transcript_58908.p2 ORF type:complete len:229 (+),score=50.09,EF-hand_1|PF00036.28|5.1e-08,EF-hand_1|PF00036.28|2.8e-05,EF-hand_1|PF00036.28|1.1e-07,EF-hand_1|PF00036.28|1.7e-08,EF-hand_7|PF13499.2|1.3e-12,EF-hand_7|PF13499.2|2.8e-11,EF-hand_7|PF13499.2|9e-12,EF-hand_6|PF13405.2|3.9e-06,EF-hand_6|PF13405.2|0.057,EF-hand_6|PF13405.2|5.8e-08,EF-hand_6|PF13405.2|0.00027,EF-hand_5|PF13202.2|8.1e-06,EF-hand_5|PF13202.2|0.0061,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.00092,EF-hand_8|PF13833.2|5.3e-05,EF-hand_8|PF13833.2|4.4e-08,EF-hand_8|PF13833.2|0.18,EF-hand_8|PF13833.2|1.3e-08,EF-hand_4|PF12763.3|7e-05,EF-hand_4|PF12763.3|0.015,EF-hand_9|PF14658.2|0.066,EF-hand_9|PF14658.2|0.016 S_Transcript_58908:2707-3393(+)
ATGGAGCAATGTATGGATATTTCTACACAATCTTTTTGGTATCTATTGCCCCTTTTGTGCTTATTTACTCGGCCCCATCACCCTCAAAAGGAGCAAAAGCAAATGGATTTTTTTTTTTGGGCAGGAGGTATGGAACTTTGGACTAATCTTCCTGTTGTCTTCTTTTGGCAGGTAATAGCTGAAAGTCTATCAGAAGAGGAAATTGCTGGGTTGAGAGAAATGTTTCAGTCAATGGATACCGATAATAGTGGTGCAATCACATTTGAAGAACTCAAAGCTGGTCTGAAAAGATATGGTTCAAACCTGAAAGATACAGAGATACGTGATCTGATGGATGCGGCTGATATTGACAACAGTGGCACCATTGACTATGGGGAGTTTATAGCAGCAACTATCCATCTCAACAAGCTTGAGCGTGAGGAACATCTCGTCCAAGCCTTTCAGTACTTTGATAAGGATGGGAGTGGATATATTACAATTGATGAGCTCCAACAAGCCTGTCAAGAACAGGGTCTTAACGATCTTTTCCTCGAAGATATTATCAGAGAAGTTGACCAAAATAATGATGGGACAATTGATTATGGTGAATTCGTTGCCATGATGAGAAAAGGCAATGGCGGAATTGGCAGGAGGACTATGCGCAATAGCCTGAATATAAGCATGAGAGATGCACCTGGAGCTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58908.p2 GENE.S_Transcript_58908~~S_Transcript_58908.p2 ORF type:complete len:229 (+),score=50.09,EF-hand_1|PF00036.28|5.1e-08,EF-hand_1|PF00036.28|2.8e-05,EF-hand_1|PF00036.28|1.1e-07,EF-hand_1|PF00036.28|1.7e-08,EF-hand_7|PF13499.2|1.3e-12,EF-hand_7|PF13499.2|2.8e-11,EF-hand_7|PF13499.2|9e-12,EF-hand_6|PF13405.2|3.9e-06,EF-hand_6|PF13405.2|0.057,EF-hand_6|PF13405.2|5.8e-08,EF-hand_6|PF13405.2|0.00027,EF-hand_5|PF13202.2|8.1e-06,EF-hand_5|PF13202.2|0.0061,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.00092,EF-hand_8|PF13833.2|5.3e-05,EF-hand_8|PF13833.2|4.4e-08,EF-hand_8|PF13833.2|0.18,EF-hand_8|PF13833.2|1.3e-08,EF-hand_4|PF12763.3|7e-05,EF-hand_4|PF12763.3|0.015,EF-hand_9|PF14658.2|0.066,EF-hand_9|PF14658.2|0.016 S_Transcript_58908:2707-3393(+)
MEQCMDISTQSFWYLLPLLCLFTRPHHPQKEQKQMDFFFWAGGMELWTNLPVVFFWQVIAESLSEEEIAGLREMFQSMDTDNSGAITFEELKAGLKRYGSNLKDTEIRDLMDAADIDNSGTIDYGEFIAATIHLNKLEREEHLVQAFQYFDKDGSGYITIDELQQACQEQGLNDLFLEDIIREVDQNNDGTIDYGEFVAMMRKGNGGIGRRTMRNSLNISMRDAPGAH*

Click here to download the sequence:
Link to NCBI Protein BLAST