Transcript Information: S_Transcript_58910.p1


Annotated TAIR IDAT4G35310.1
Annotated Gene Namecalmodulin-domain protein kinase 5
Annotated Gene Symbol(s)CPK5, ATCPK5
Annotation TypeOrtholog
Chromosome Positionchr4:16802436-16804628 | Forward length=556
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.97849671161
Replicate 243.858382701703
Replicate 349.106177911179
Condition 2: 8 Hour
Replicate 159.364278581777
Replicate 253.955634954635
Replicate 352.404531914669
Condition 3: 24 Hour
Replicate 141.951246841799
Replicate 242.504449392319
Replicate 337.527609322491


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58910.p1 GENE.S_Transcript_58910~~S_Transcript_58910.p1 ORF type:complete len:578 (+),score=113.75,Pkinase|PF00069.21|1.4e-72,EF-hand_1|PF00036.28|1.7e-07,EF-hand_1|PF00036.28|9.4e-05,EF-hand_1|PF00036.28|3.6e-07,EF-hand_1|PF00036.28|5.7e-08,EF-hand_7|PF13499.2|5.8e-12,EF-hand_7|PF13499.2|1.1e-10,EF-hand_7|PF13499.2|3.4e-11,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|0.19,EF-hand_6|PF13405.2|2e-07,EF-hand_6|PF13405.2|0.00096,Pkinase_Tyr|PF07714.13|1.8e-23,EF-hand_5|PF13202.2|2.6e-05,EF-hand_5|PF13202.2|0.019,EF-hand_5|PF13202.2|9.1e-06,EF-hand_5|PF13202.2|0.0029,EF-hand_8|PF13833.2|8.5e+03,EF-hand_8|PF13833.2|4.9e-05,EF-hand_8|PF13833.2|1.7e-07,EF-hand_8|PF13833.2|0.61,EF-hand_8|PF13833.2|5e-08,EF-hand_4|PF12763.3|0.0003,EF-hand_4|PF12763.3|0.064,EF-hand_9|PF14658.2|0.27,EF-hand_9|PF14658.2|0.068 S_Transcript_58910:827-2560(+)
ATGGGCAACACATGCCGGGGATCTTTTGGGACAAAACTATATCAGGGCGAAAACCAGCCCGAAGACCATTCCTGTTCCAATTCCAATACAAATACCAATACCACTAGCACACATTCTAGGAGAAACATTTCTGATAATTCTGGTTCTGATTATTCTCCAACTAGTTTAAGAACCCAACAGCTTGTTAACCAAGAATTTGGTAATACAAACAACAATAATAATCCTAAGAAGGATCCTGTTGTTGTACCAATGACAAAAGATAGCCTCAATAGAAAGCCTAATGATCATCAGCAGGCTTACTATGTGTTGGGTCATAAGACCGCGAACATTCGCGATCTTTACATGTTAGGAAGGAAATTGGGGCAAGGACAATTTGGGACCACCTATCTTTGCACTGAGATTTCTACTGGGATTGAATACGCGTGTAAATCGATCTCCAAAAGGAAGCTTATATCTAAGGAGGATGTGGAGGATGTTAGGAGAGAGATTCAGATAATGCACCACCTGGCTGGTCACAAGAATATTGTGACAATAAAGGGTGCATATGAGGATCCTTTATATGTTCACATTGTTATGGAGATTTGTTCTGGGGGTGAGTTGTTCGACCGTATTATTCAGAGGGGTCATTACAGTGAGAGGAAGGCTGCTGAATTGACCAGGATCATTGTTGGGGTTGTTGAGACTTGCCATTCCCTTGGGGTTATGCACCGAGATCTCAAGCCTGAGAATTTCTTGTTGGTCAACAAGGATGATGATTTCTCTCTCAAGGCTATCGACTTTGGATTGTCCGTTTTCTTTAAACCAGGGCAGATTTTTACAGATGTAGTTGGAAGTCCTTACTACGTTGCACCCGAGGTTCTGCTGAAGCATTATGGCCCTGAAGCAGATGTATGGACTGCTGGAGTTATTTTGTATATATTGCTCAGTGGTGTACCACCATTTTGGGCTGAAACGCAGCAGGGAATATTTGATGCAGTTTTAAAGGCTCACATTGACTTCGACTCGGATCCATGGCCCCTAATATCTGACAGTGCAAAGGACCTGATCAGAAAGATGCTCTGCTCACGACCTGCAGAACGATTAACTGCTCATCAAGTCTTATGTCATCCCTGGATTTGTGAAAATGGGGTTGCACCTGATAGAGCATTGGACCCAGCTGTTCTGTCTCGTCTGAAACACTTCTCTGCGATGAATAAGCTGAAGAAGATGGCTTTGCGGGTGATAGCTGAAAGTCTATCAGAAGAAGAAATTGCTGGGTTGAGAGAAATGTTTCAGTCAATGGATACCGATAATAGTGGTGCAATCACATTTGAAGAACTCAAAGCTGGTCTGAAAAGATATGGTTCAAACCTGAAAGATACAGAGATACGTGATCTGATGGATGCGGCTGATATTGACAACAGTGGCACCATTGACTATGGGGAGTTTATAGCAGCAACTATCCATCTCAACAAGCTTGAGCGTGAGGAACATCTCGTCCAAGCCTTTCAGTACTTTGATAAGGATGGGAGTGGATATATTACAATTGATGAGCTCCAACAAGCCTGTCAAGAACAGGGTCTTAACGATCTTTTCCTCGAAGATATTATCAGAGAAGTTGACCAAAATAATGATGGGACAATTGATTATGGTGAATTCGTTGCCATGATGAGAAAAGGCAATGGCGGAATTGGCAGGAGGACTATGCGCAATAGCCTGAATATAAGCATGAGAGATGCACCTGGAGCTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58910.p1 GENE.S_Transcript_58910~~S_Transcript_58910.p1 ORF type:complete len:578 (+),score=113.75,Pkinase|PF00069.21|1.4e-72,EF-hand_1|PF00036.28|1.7e-07,EF-hand_1|PF00036.28|9.4e-05,EF-hand_1|PF00036.28|3.6e-07,EF-hand_1|PF00036.28|5.7e-08,EF-hand_7|PF13499.2|5.8e-12,EF-hand_7|PF13499.2|1.1e-10,EF-hand_7|PF13499.2|3.4e-11,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|0.19,EF-hand_6|PF13405.2|2e-07,EF-hand_6|PF13405.2|0.00096,Pkinase_Tyr|PF07714.13|1.8e-23,EF-hand_5|PF13202.2|2.6e-05,EF-hand_5|PF13202.2|0.019,EF-hand_5|PF13202.2|9.1e-06,EF-hand_5|PF13202.2|0.0029,EF-hand_8|PF13833.2|8.5e+03,EF-hand_8|PF13833.2|4.9e-05,EF-hand_8|PF13833.2|1.7e-07,EF-hand_8|PF13833.2|0.61,EF-hand_8|PF13833.2|5e-08,EF-hand_4|PF12763.3|0.0003,EF-hand_4|PF12763.3|0.064,EF-hand_9|PF14658.2|0.27,EF-hand_9|PF14658.2|0.068 S_Transcript_58910:827-2560(+)
MGNTCRGSFGTKLYQGENQPEDHSCSNSNTNTNTTSTHSRRNISDNSGSDYSPTSLRTQQLVNQEFGNTNNNNNPKKDPVVVPMTKDSLNRKPNDHQQAYYVLGHKTANIRDLYMLGRKLGQGQFGTTYLCTEISTGIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMEICSGGELFDRIIQRGHYSERKAAELTRIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKAHIDFDSDPWPLISDSAKDLIRKMLCSRPAERLTAHQVLCHPWICENGVAPDRALDPAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIAGLREMFQSMDTDNSGAITFEELKAGLKRYGSNLKDTEIRDLMDAADIDNSGTIDYGEFIAATIHLNKLEREEHLVQAFQYFDKDGSGYITIDELQQACQEQGLNDLFLEDIIREVDQNNDGTIDYGEFVAMMRKGNGGIGRRTMRNSLNISMRDAPGAH*

Click here to download the sequence:
Link to NCBI Protein BLAST