Transcript Information: S_Transcript_58922.p1


Annotated TAIR IDAT5G17790.1
Annotated Gene Namezinc finger (Ran-binding) family protein
Annotated Gene Symbol(s)VAR3
Annotation TypeOrtholog
Chromosome Positionchr5:5869810-5872671 | Reverse length=758
E-Value1.2E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.080700699936
Replicate 219.029155993357
Replicate 319.364872887781
Condition 2: 8 Hour
Replicate 110.721932353892
Replicate 211.931652607854
Replicate 311.309241368198
Condition 3: 24 Hour
Replicate 119.660395141535
Replicate 217.753319068139
Replicate 318.285982193709


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58922.p1 GENE.S_Transcript_58922~~S_Transcript_58922.p1 ORF type:5prime_partial len:720 (+),score=156.40,zf-RanBP|PF00641.14|8.2e-09,zf-RanBP|PF00641.14|0.00025 S_Transcript_58922:1-2160(+)
CCACTCCTCATTCCCCGCTCTCCTTCTCTCCGTCTCCTCCGCCACTTCACTCACCGCTCCCCACTCTTTCTCTCTCCTCCTCCTTCTCTCTCCCTCTTTCTCTCTCCTCCCAAACTCTCCCACCAACTCCACACTCAACCCCTCAACTGGGACGACAACAACAACGAAACCCACTTCTCTTCTTTTCCAGAAGCTTCCAATAACAACCCCAAAAGAGCTTCTCATCCATGGCCTGAATGGTTGGGCTTTACCCATTGGCTTTCCCTTAGTGGGTTCTCTAATGGCTCCATCCATGTTGATGAGTTTGTTGATGATTTGGAATTGCCCCTTGATTTTCTTAGGGCTGCTCATGGCTGCTTGGCCTTTGCCCGCCAGTATCCTACTCTTTTGTGGTGTCTTTCAAGAGAGGATATTGAGGTGGTTATCACCAGTGGGTCTCCATTTTTGTTCAAGGATGCTTCTGGTGCTTCAACAAGGTTGAAGTCTTTTCTGGGTAGTGCCACAAATTATGTATTAGAATCTGATAGACCGAGCACAGTTGATCTCATGAAGTTTCTAGTCAGTTATGCACGCATGGCAATTGTTTCTTCAGAAAAAATGTCCGTGTACAGTAGAGTCGAATCATCAACGAGGAAACTATTCAGTGAGTTGGCTAAATCAGGAGGTATTTCTGTGGAGTCTGTTCCACCTGTAGAGAAACGTTTCCCTGAAGGAAATGGGCAAGCACCAAGTTCGTTTGGAAAAAATATTGTAATGAAGAGAGGCGACTGGATATGCTCAAGATGCAGTTTTATGAACTTTGCAAAGAACTCGAAATGTCTTCAGTGCGAGGAACCTCGGCCAAAGAGATACCTGACTGGTGGTGAATGGGACTGTCCCGAATGCAATTTTTGTAACTTCAGTAGAAAAGTGGTATGCCTGAGGTGCAACTGCAAGAAACCAGTTACGAACTCATTTCAGAGCCCGAATTCAGTTTCAGATTTGACGGATGACACTTCCTCTGTTAGAAGTAACAAGGAAGAAAATTTACCTGTGACTGAAGAGAAGCAGCAATCGTGGTTCACTAAATTAGCTCAGCTGGAAAAGTCATCTGACACGGGCAGCGCTATAGCAGATAAAGATTTTCCTGTGATCAAACAGGTAGGGAAGGACAGATTTGCCCAAAGCACAAGGAATAACGATAGAAATTCGGATCACGGGGACCTCCAGACACCTGGTGTAGACAGCAACATCCATGTGAAAATCAGCCAGTATCTGGATGAAGCTATAGGCGAAAGATCTTCTACTCCTCTTACGACTAATGCTAGTGACAATAGTGGAGGTGTAGATCCTTCTGTGTTATCTAATGAGAAGCCTCCAGATCAGATTGGGGACGGAGAGAGTGAGCAAGCTGAAAAGTCTGATGAGGACTTCCCAGAGATCATGCCAATGCGCAAAGGAGAAAACCGTTTTGTTGTCAGTAAGAAGAAAGACCGTTCTTTGACTTCTCCAATGTATAAAAGGCGTATGGCGATGGAGCAAGCTGGCAATAACAATTATGTCCCATTTGTCCCCTTCCCACCTGGTTACTTTGCCCAGGACAAACCAAAGGAGGGGTCGGATCATTCAATCAACACAACCTCCAGCAATTATAATGACATGTCATCAACTGCAGATCGACAGTCTGGTGCTATCAGCTCGAATTCTGGCGGATCTGGAGAAACAAAAGAAGTTGGAGCCCTCAACCCAGTTTATGACACATCCCATAATGTCGATCAAACCTCAAAATCTTCTGATTCTCAGTTTAGAAAGAGTTCACTTGATGGTTATCCGAAAACTGAGTCTCCCGGATCAAGTGAGAATCAGAATGTTAGAGATGTCTGGAAAGGAAGGAGTTTGGAGGGATCAGCCGTGAAGGAACCAGATCCACTTGACATGTCCGAGGAGGCTAAGGCAGAGAGGTGGTTTCGACGTGTTGCTCAGATAAAAGACATTTCAGAGCTTAGCCAGATTCCTGACGAGGATTTCCCCTCTATTATGCCAATGAGAAAAGGAGTAAACAGGTTTGTGGTGAGCAAGAGAAAAACACCCTTGGAGCGACGGTTAACATCTTCACAGTACCGGAGGAATCTTCCGGTTGTCAACTCAGATCCTGTGAAGAAGGAGAATGATTCAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58922.p1 GENE.S_Transcript_58922~~S_Transcript_58922.p1 ORF type:5prime_partial len:720 (+),score=156.40,zf-RanBP|PF00641.14|8.2e-09,zf-RanBP|PF00641.14|0.00025 S_Transcript_58922:1-2160(+)
PLLIPRSPSLRLLRHFTHRSPLFLSPPPSLSLFLSPPKLSHQLHTQPLNWDDNNNETHFSSFPEASNNNPKRASHPWPEWLGFTHWLSLSGFSNGSIHVDEFVDDLELPLDFLRAAHGCLAFARQYPTLLWCLSREDIEVVITSGSPFLFKDASGASTRLKSFLGSATNYVLESDRPSTVDLMKFLVSYARMAIVSSEKMSVYSRVESSTRKLFSELAKSGGISVESVPPVEKRFPEGNGQAPSSFGKNIVMKRGDWICSRCSFMNFAKNSKCLQCEEPRPKRYLTGGEWDCPECNFCNFSRKVVCLRCNCKKPVTNSFQSPNSVSDLTDDTSSVRSNKEENLPVTEEKQQSWFTKLAQLEKSSDTGSAIADKDFPVIKQVGKDRFAQSTRNNDRNSDHGDLQTPGVDSNIHVKISQYLDEAIGERSSTPLTTNASDNSGGVDPSVLSNEKPPDQIGDGESEQAEKSDEDFPEIMPMRKGENRFVVSKKKDRSLTSPMYKRRMAMEQAGNNNYVPFVPFPPGYFAQDKPKEGSDHSINTTSSNYNDMSSTADRQSGAISSNSGGSGETKEVGALNPVYDTSHNVDQTSKSSDSQFRKSSLDGYPKTESPGSSENQNVRDVWKGRSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSSQYRRNLPVVNSDPVKKENDSS*

Click here to download the sequence:
Link to NCBI Protein BLAST