Transcript Information: S_Transcript_59336.p1


Annotated TAIR IDAT5G13340.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4277939-4279397 | Reverse length=242
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.302236420036
Replicate 27.0767438203349
Replicate 39.0473799655399
Condition 2: 8 Hour
Replicate 115.088719564009
Replicate 211.819089847403
Replicate 310.456830900557
Condition 3: 24 Hour
Replicate 15.7703465824211
Replicate 29.8352389859621
Replicate 36.9003706391355


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59336.p1 GENE.S_Transcript_59336~~S_Transcript_59336.p1 ORF type:internal len:106 (+),score=45.01,ARGLU|PF15346.2|4.8e+02,ARGLU|PF15346.2|1.1e-17 S_Transcript_59336:2-316(+)
ACTCCTTCTCCAAAGTCCCGTAGTCCAAGTGTTGCATCAGCTGAGCGCAAGGAAGCTATTCAGAAACAGAAAAAGGAAGAAGAGCAAAAGAAAAGGATTCAACATGAGGTAGATTTGAAATTATTAGAAGAAGAGACTGCAAAGAGGATTGAAGAAGCTATACGGAAGAATGTTGAGGACAAGCTGAATTCTGAAGATGTTAAATTAGAAATTGAAAGGCGCATCAAGGAAGGGCAGAAGAAATTATTTGACGATGTACTTGCCCAGCTTAAGAGAGAGAAGGAAAATGCTCTCATGGAGGCAAGGAAGAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59336.p1 GENE.S_Transcript_59336~~S_Transcript_59336.p1 ORF type:internal len:106 (+),score=45.01,ARGLU|PF15346.2|4.8e+02,ARGLU|PF15346.2|1.1e-17 S_Transcript_59336:2-316(+)
TPSPKSRSPSVASAERKEAIQKQKKEEEQKKRIQHEVDLKLLEEETAKRIEEAIRKNVEDKLNSEDVKLEIERRIKEGQKKLFDDVLAQLKREKENALMEARKKE

Click here to download the sequence:
Link to NCBI Protein BLAST