Transcript Information: S_Transcript_59361.p1


Annotated TAIR IDAT3G08840.2
Annotated Gene NameD-alanine--D-alanine ligase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2679648-2686157 | Reverse length=937
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.716228066994
Replicate 25.4585727904093
Replicate 35.3694041762381
Condition 2: 8 Hour
Replicate 110.110541784417
Replicate 210.55518750551
Replicate 39.6644924699225
Condition 3: 24 Hour
Replicate 17.4911107942429
Replicate 26.441842876131
Replicate 36.9948362504407


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59361.p1 GENE.S_Transcript_59361~~S_Transcript_59361.p1 ORF type:3prime_partial len:869 (+),score=191.64,Dala_Dala_lig_N|PF01820.17|9.4e-23,Dala_Dala_lig_N|PF01820.17|4.2e-18,Dala_Dala_lig_C|PF07478.9|3.1e-13,Dala_Dala_lig_C|PF07478.9|1.1,Dala_Dala_lig_C|PF07478.9|9.6e+02,ATP-grasp_4|PF13535.2|4.4e+02,ATP-grasp_4|PF13535.2|0.00095,ATP-grasp_4|PF13535.2|38 S_Transcript_59361:247-2850(+)
ATGGCTTCTCTCTGCAAATCCTCTCTCTTCTACAATCCCAAAGTTCGTCGTCGAAGAATCAACGCTATAGATGAACATTCACAACCTCTCCTCTCATCAAAAACCGTAATCAGCTCAAAATTGGACCTCAAAACCCGAAATTTGTCATCACCTAGGGATTTCCGTCAAATTTCTAGAACAATCAAAGCGAGCACCGAAGTAGCAGGTGATCGAAGCACTGTGATCGAAACTGAGAAGAACAAAAATAGGGGAGAGAAAGGCGAGGTTCTTCGTGTTGGCTTGATTTGTGGTGGTCCTTCTGCTGAGCGTGGAATTTCTCTCAATTCTGCTCGTTCTGTTCTTGATCATATTCAAGGGGATGATTTGCATGTGAGCTGCTACTACATTGATTCTCAGCTTAATGCTTTTGCCATATCCCCTGCCCAGCTTTATTCAAACACCCCTGCTGATTTTGACTTCAAAATTGAAAGCCTTGCGCAAGGTTTCCGCTCTTTGTCAGATTTTGCGGAGCACCTTGCCAATTCAGTTGATATTGTCTTCCCTGTAATCCATGGTCCCTTTGGTGAAGATGGTACCATTCAGGAGCTACTGGAGAGATTAAACATTCCATTTGTCGGTACACGATCAAGTGAATGTCGCAAGGCATTTGACAAGTATGAAGCTTCTGTGGAGCTTGGGAAAAAAGGATTCTTGACAGTTCCCAGTTTCCTGGTGCAGGGTAGTGACTCAGATATAAGTGATCTACTGAAGTGGTTTGAAAGCAATCAATTGGATGTGAACGCAGGAAAAGTGGTGGTAAAACCAGCAAGAGGAGGATCAAGCATAGGTGTTACTGTTGCTTATGGAGCTGCTGATTCTTTCAAAAAGGCTAATCGAATAATTTCAGAGGGAATTGATGATAAAGCCCTGGTTGAGCTCTTCCTTGAAGGAGGAAGGGAGTTTACTGCTATTGTTCTTGATGTGGGAAATGGTTCTGACTGCAATCCTGTAGTATTATTGCCAACAGAGGTGGAGCTTCAATCTCATGGTAGTGTTGACATAAGAGAGAGGGATGCAATATTCAATTACCGCAGGAAGTATCTACCTACTCAGCAGGTTGCTTACCATACCCCCCCTCGTTTTCCTATAGATGTCATCGAGTTCATTCGTGGTGGAGCCTCACTGTTATTCCAACAGCTTGAATTATGTGATTTTGCTAGAATTGATGGTTGGTATTTGCCGCCATCTTCTCAAATATCTTTCGCAGGGCAACAGTTTGGAAGAACTAAATCCGGAATAGTGGTATTCACAGACATCAATCTGATCAGTGGGATGGAGCAGACCAGTTTTCTTTTTCAACAAGCTTCAAAGGTGGGGTTTTCCCATTCAAATATCCTAAGAAGCATCCTTCAGCATGCATGTTCACGATTTCCAAGCCTGGCGTCGTATTCTGGTGCATCACCACTGTTGTTCGGAAAGCCAAAGAACTCCCGGATAAAGGAGCCAGTTGCCAAAAGGGATAATAATCGTAAAGTTTTTGTAATTTTTGGAGGGAACACTTCAGAGAGACAAGTATCCCTTATGAGTGGAACAAATGTTTGGCTCAACTTGCAAGCCTTTGATGATCTTGATGTGACTCCTTGTTTGCTTGCACCAACGAGTTCATCCTACACACAAATCACCAAGGAGGGTGACTTGAGCTCCAGATCGGTTTGGTCTTTGCCTTATTCTCTAGTGCTGAGGCATACTACGGAGGAAGTACTAGCAGCTTGCATGGAGGCATTGGAACCAAACCAAGCTGCACTGACATCACACTTGCGGAAACAGGTGATGAATGATCTTGTAGAAAGCCTGAAGAAGCACAGCTGGTTTACTGGATTTGATGTATCTGATGAATTGCCTGTGAAGTATTCTCTTGACGAATGGATCAATCTGGCGAAGGAAGTTCAGGCCACAGTTTTTATTGCAGTGCATGGAGGCATTGGAGAAGATGGTACACTTCAATCTTTGTTAGAGGCTGAAGGGATTCCTTACACTGGTCCTGGTATAATGTCTTCCAAAATATGCATGGACAAAGTTGCTACTTCGCTTGCTCTTAAACAACTTGCCAATTTTGGTGTCCTTACCATAAACAAGGAAGTAAGGACAAAGCAAGACCTCCTTCACATGCCTGCTGCTGATCTTTGGCTTGATCTGACAAGGAAGCTGGAGTGTGAAACCCTATGCATTAAACCTGCAAGAGATGGCTGCTCAACTGGTGTTGCAAGACTACGCTGTTCGGAAGACTTGGCAATATATGTAAATGCGTTGGAGAATTGTCTTCTACGAATCCCTGCAGACAGTTTCTCAAAGGCCCATGGAATGATTGAGATGCCTGAGCTTTTAATATTTGAACCCTTCATTGAGACGGATGATATTAGGGTGTCATCCAGTACACTTGATTTCAATTGGAAAGGACAAAGTAGGTGGATAGAGGTAACTGTTGGTGTGATGGGGAAAAGAGGATCGATGCATTCTTTGAGTCCCAGTGTGACTGTTAAGGAAACTGGCGATATTTTATCACTAGAAGAGAAATTTCAAGGTGGAACTGGCATCAATATTACTCCACCCCCGTTGTCGATAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59361.p1 GENE.S_Transcript_59361~~S_Transcript_59361.p1 ORF type:3prime_partial len:869 (+),score=191.64,Dala_Dala_lig_N|PF01820.17|9.4e-23,Dala_Dala_lig_N|PF01820.17|4.2e-18,Dala_Dala_lig_C|PF07478.9|3.1e-13,Dala_Dala_lig_C|PF07478.9|1.1,Dala_Dala_lig_C|PF07478.9|9.6e+02,ATP-grasp_4|PF13535.2|4.4e+02,ATP-grasp_4|PF13535.2|0.00095,ATP-grasp_4|PF13535.2|38 S_Transcript_59361:247-2850(+)
MASLCKSSLFYNPKVRRRRINAIDEHSQPLLSSKTVISSKLDLKTRNLSSPRDFRQISRTIKASTEVAGDRSTVIETEKNKNRGEKGEVLRVGLICGGPSAERGISLNSARSVLDHIQGDDLHVSCYYIDSQLNAFAISPAQLYSNTPADFDFKIESLAQGFRSLSDFAEHLANSVDIVFPVIHGPFGEDGTIQELLERLNIPFVGTRSSECRKAFDKYEASVELGKKGFLTVPSFLVQGSDSDISDLLKWFESNQLDVNAGKVVVKPARGGSSIGVTVAYGAADSFKKANRIISEGIDDKALVELFLEGGREFTAIVLDVGNGSDCNPVVLLPTEVELQSHGSVDIRERDAIFNYRRKYLPTQQVAYHTPPRFPIDVIEFIRGGASLLFQQLELCDFARIDGWYLPPSSQISFAGQQFGRTKSGIVVFTDINLISGMEQTSFLFQQASKVGFSHSNILRSILQHACSRFPSLASYSGASPLLFGKPKNSRIKEPVAKRDNNRKVFVIFGGNTSERQVSLMSGTNVWLNLQAFDDLDVTPCLLAPTSSSYTQITKEGDLSSRSVWSLPYSLVLRHTTEEVLAACMEALEPNQAALTSHLRKQVMNDLVESLKKHSWFTGFDVSDELPVKYSLDEWINLAKEVQATVFIAVHGGIGEDGTLQSLLEAEGIPYTGPGIMSSKICMDKVATSLALKQLANFGVLTINKEVRTKQDLLHMPAADLWLDLTRKLECETLCIKPARDGCSTGVARLRCSEDLAIYVNALENCLLRIPADSFSKAHGMIEMPELLIFEPFIETDDIRVSSSTLDFNWKGQSRWIEVTVGVMGKRGSMHSLSPSVTVKETGDILSLEEKFQGGTGINITPPPLSIM

Click here to download the sequence:
Link to NCBI Protein BLAST