Transcript Information: S_Transcript_59451.p1


Annotated TAIR IDAT4G35730.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16931111-16933241 | Forward length=466
E-Value7.6E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4457913896357
Replicate 22.5594883477395
Replicate 32.0539474060622
Condition 2: 8 Hour
Replicate 12.0286334176391
Replicate 20.83050946226363
Replicate 32.0277256422372
Condition 3: 24 Hour
Replicate 10.760262766494
Replicate 21.5775274879128
Replicate 32.3993128088393


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59451.p1 GENE.S_Transcript_59451~~S_Transcript_59451.p1 ORF type:5prime_partial len:431 (+),score=95.18,Ist1|PF03398.10|1.6e-61 S_Transcript_59451:1-1293(+)
CTAAACACTCCCTTATTCTCTCTCCATAACTTTTCTTCTAGCTTAGCATTTTTTGTGTTTTTGTTTGTGTTAGAGAGAGAGAGGAAAAAAAGATCACAGAAAATGTCAGTGGCATATGCAGTGAGAAGCCATTGTAGGAAGCTGGTGAAGCTGGGTTCCATTTTTCGCCGAGACTTCAATTCCTCCAAATGCAAGACATGGGCAAAGATGACAACGGCGAGGATAAAGTTGCTGAGGAACAAGAGAGAGACGATTGTTCGTCAAATGAGGCGTGACGTGGCTTTGCTTCTTCAATCGGGTCAAGCTTCCACTGCTCGTATTCGGGTGGAACACGTGATTAGAGAACAGAATATGATGGCTGCAAATGAGATCCTTGAGCTCTTCTGTGAGAGAATTGTTACTAGACTCTCTATTATTGCAAAGCAAAGGGAATGCCCTGCAGATTTGAAAGAAGCGATCTCTAGTTTGATATTTGCTGGGCCAAGATGTTCTGATATTCCAGAACTGCAGGCAATACGAGACATCTTTCAGAAGAAATATGGCAAAGACTTTGTGTCTGCAGCTACTGATTTACGTCCCAACTGCGGTGTTAATCGCCTGCTAATTGAAAAGCTCTCAGCCTTAAATCCTCCTGGCGAACTGAAGCTCAAAGTGATGAAGGAAATAGCTAAGGAATACCAGGTTGAGTGGGATACAACCGAGACAGAGATGGAGCTTCTCAAGCCCCCAGAGGAGCGCATAGAGGGACCACGTACATTTGTCAGTGCCGCAAGCCTGCCCGTAAAGCCTGGGACAACCCCATCAACTGAAACTCATAAGCCAGCAACAGCCAGGTTATCAGGTGGTGGTGAGATCAATGGCATGAATTTTCAAGATGCTACATCAGCAGCAAAAGCAGCGGCAGATTCTGCTGAGAATGCTATCACTGCTGCACAAGCTGCTGCTCAACTGGCTCAAACAGGATCTCATGGCAGCAACTTCAACGCCTCAAATTTCAACAGGGCTAATGAACGCAATTACAGATCGCAGAGCTTAGGGGCAACCAACTATCGTCGCGATAGCACTGAGACGAGCAAGGATGACGTGGATTATGTGGATTTCAACAGAAGGCATAGCTCTAATGTTCGTGCGTACACAGATATAAAATTTGATGATTCAGACTGTGATGAAGAGAAAGAGATTGAATATGATCCCTTTGACCAAGCAACGCCAAATGTTGGTAAACCTGGAAAGTTGCCAGATTACGATGCTCTAGCAGCTCGATTTGAAGAACTCAAGTATCGCAAGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59451.p1 GENE.S_Transcript_59451~~S_Transcript_59451.p1 ORF type:5prime_partial len:431 (+),score=95.18,Ist1|PF03398.10|1.6e-61 S_Transcript_59451:1-1293(+)
LNTPLFSLHNFSSSLAFFVFLFVLERERKKRSQKMSVAYAVRSHCRKLVKLGSIFRRDFNSSKCKTWAKMTTARIKLLRNKRETIVRQMRRDVALLLQSGQASTARIRVEHVIREQNMMAANEILELFCERIVTRLSIIAKQRECPADLKEAISSLIFAGPRCSDIPELQAIRDIFQKKYGKDFVSAATDLRPNCGVNRLLIEKLSALNPPGELKLKVMKEIAKEYQVEWDTTETEMELLKPPEERIEGPRTFVSAASLPVKPGTTPSTETHKPATARLSGGGEINGMNFQDATSAAKAAADSAENAITAAQAAAQLAQTGSHGSNFNASNFNRANERNYRSQSLGATNYRRDSTETSKDDVDYVDFNRRHSSNVRAYTDIKFDDSDCDEEKEIEYDPFDQATPNVGKPGKLPDYDALAARFEELKYRKT*

Click here to download the sequence:
Link to NCBI Protein BLAST