Transcript Information: S_Transcript_59454.p1


Annotated TAIR IDAT4G35730.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16931111-16933241 | Forward length=466
E-Value4.1E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3073053238334
Replicate 20.85154626362338
Replicate 30.7118249014723
Condition 2: 8 Hour
Replicate 11.1972148949969
Replicate 22.9044154374382
Replicate 31.1218867160516
Condition 3: 24 Hour
Replicate 11.1497307100313
Replicate 20.71569931293729
Replicate 30.08849840142146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59454.p1 GENE.S_Transcript_59454~~S_Transcript_59454.p1 ORF type:internal len:285 (+),score=43.14,Ist1|PF03398.10|5.8e-62 S_Transcript_59454:1-852(+)
CTAAACACTCCCTTATTCTCTCTCCATAACTTTTCTTCTAGCTTAGCATTTTTTGTGTTTTTGTTTGTGTTAGAGAGAGAGAGGAAAAAAAGATCACAGAAAATGTCAGTGGCATATGCAGTGAGAAGCCATTGTAGGAAGCTGGTGAAGCTGGGTTCCATTTTTCGCCGAGACTTCAATTCCTCCAAATGCAAGACATGGGCAAAGATGACAACGGCGAGGATAAAGTTGCTGAGGAACAAGAGAGAGACGATTGTTCGTCAAATGAGGCGTGACGTGGCTTTGCTTCTTCAATCGGGTCAAGCTTCCACTGCTCGTATTCGGGTGGAACACGTGATTAGAGAACAGAATATGATGGCTGCAAATGAGATCCTTGAGCTCTTCTGTGAGAGAATTGTTACTAGACTCTCTATTATTGCAAAGCAAAGGGAATGCCCTGCAGATTTGAAAGAAGCGATCTCTAGTTTGATATTTGCTGGGCCAAGATGTTCTGATATTCCAGAACTGCAGGCAATACGAGACATCTTTCAGAAGAAATATGGCAAAGACTTTGTGTCTGCAGCTACTGATTTACGTCCCAACTGCGGTGTTAATCGCCTGCTAATTGAAAAGCTCTCAGCCTTAAATCCTCCTGGCGAACTGAAGCTCAAAGTGATGAAGGAAATAGCTAAGGAATACCAGGTTGAGTGGGATACAACCGAGACAGAGATGGAGCTTCTCAAGCCCCCAGAGGAGCGCATAGTTTGTTGTACTTCTCTTTGTTTAGTCCTTATTATGAGTATGTTTGGCCTAATTTTTCCTATAAACTATTTATCCCTATCACAAATCTTGTATCCTCCCCCCTCATCATTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59454.p1 GENE.S_Transcript_59454~~S_Transcript_59454.p1 ORF type:internal len:285 (+),score=43.14,Ist1|PF03398.10|5.8e-62 S_Transcript_59454:1-852(+)
LNTPLFSLHNFSSSLAFFVFLFVLERERKKRSQKMSVAYAVRSHCRKLVKLGSIFRRDFNSSKCKTWAKMTTARIKLLRNKRETIVRQMRRDVALLLQSGQASTARIRVEHVIREQNMMAANEILELFCERIVTRLSIIAKQRECPADLKEAISSLIFAGPRCSDIPELQAIRDIFQKKYGKDFVSAATDLRPNCGVNRLLIEKLSALNPPGELKLKVMKEIAKEYQVEWDTTETEMELLKPPEERIVCCTSLCLVLIMSMFGLIFPINYLSLSQILYPPPSSF

Click here to download the sequence:
Link to NCBI Protein BLAST