Transcript Information: S_Transcript_59480.p1


Annotated TAIR IDAT3G19895.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6917530-6921211 | Reverse length=554
E-Value1.6E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0398741781234
Replicate 28.3526430829597
Replicate 38.3574157778458
Condition 2: 8 Hour
Replicate 111.539360343688
Replicate 212.062832344939
Replicate 312.145549878173
Condition 3: 24 Hour
Replicate 19.6485049451764
Replicate 27.6701618527983
Replicate 38.8735299627942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59480.p1 GENE.S_Transcript_59480~~S_Transcript_59480.p1 ORF type:3prime_partial len:523 (+),score=95.61 S_Transcript_59480:291-1856(+)
ATGGTGATGATGATTTCTCCTTCTCAGTCGCAACCCCAGTCACAGTCAAACACCAACAGCAACCCTAATAATCATCACCACAATCAAACCCCATCCCCGCTGTCTCTCTCTCCTCTCTCCACCTTCCCTCCTCAACCACCCTCTCACGTGGTTTCGATCGCCTCCCTCCCTTCCGAAGTTGCTGTTCTTCCGGCCAGGGTTAAGCTCTCCGACCTCGCCCCCTACGACGGGGCTCCGGCCGGGCCCTACCTCAAGGCGGTCGAGACTCTCTCAGGTTCCCTCACCAGGCACAACGCTGCCGTCATCGAGCTTGGGAGCGACGATGCTGCCATCATCCGGTGCGGGTTCGAGTCGTCTAGGTTGTTCTTCCGGAGCCGGGCTCAGGCTGGCGCCGGCAAGCCTGGCCGTGGTGTCTTCATGTATAGAGCCGGAAGGGCTCTGGAAGATTGTGACTCATCTCCTCCTTGCATGAGTGAGATTTTTAAATGCCTTGGTAAGGCTGCCCGTGCTGCTTTGTGTGCCATTGCGAGGCAACTCCGTTTGCGTAGCGATGTTTTTAACCATCTACTTGATGATACTCCTCTACCTGCCAATGAGGCATCCTCCTCTGTGCTTGTTGCAACCTATTTTCATTCTTCTATGCAAAATGGAAAAGGGGCAATCGGAGGTGGCAAACCTTCTATCAATGGTGAATTTGAAAAGGGGTTGTTAACTGTAATAGCTTCAGATAGTCATGGCCTCCAGGTTTGTGACCCCAATGGTCGATGGTACCTGGCAGATAATGGGTTAGCTCCAGGTTCTGTTCTGTTGCTGACAGGAAAGGCCCTTAGTCATGCTACTGCTGGCCTCCGCCCTGCTGCCTCATATCGTGCTGCCCCTGATCTCATATCAGGCTCTGGCTGTGGTGGAAGGACCTCATTAGCCTTTAGGCTTATGCCACAGAGCAATGCCATACTGGACTGCTCACCAATTGCTGCTGCTGGTCATGTCATTCCTCAGAGCTATGTCCCCATATCTGTAAGCCAATTCATGGATGACCTTTCTGCAGAAGAGGATGCTTTGTGTAATCACACAGATAGTACTTATGTGGAGCAAAAAAATTTGAACAAGGAGCTATCATTGCGAACTGTACTTTCAGATCCCTTATCTGGCACATTTCTTGAAGATGCAATGGTCGTCTCTTGTGGACACTCATTTGGTGGTCTTATGCTGAGAAAGGTCATTGAAGCGTCCAGGTGCATTCTTTGTCATACAGATATTGATACTCGGACGTTAATCCCTAACCATGCTCTAAGGGCTGCTGCTGCAGCTGTAAAGCATGAGGATGATCGAAGACTCTTCCATAATGCAGCTCTTCGGAAGCGACGAAAAGAATTTGGGGATCTGGCAGATCCAAGAAGGATTAACAAGGAAAATTGTGATATTGTTGCCGACAGTGGGATACAGAAAGGAGTACAATATCCATTTTCCGTGAATGAGAAAGTCGTAATTAAGGGAAACCGGAGAACGCCGGATAAATTTGTAGGTAAAGAGGCCATCATAACATCTCAGTGTCTCAATGGCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59480.p1 GENE.S_Transcript_59480~~S_Transcript_59480.p1 ORF type:3prime_partial len:523 (+),score=95.61 S_Transcript_59480:291-1856(+)
MVMMISPSQSQPQSQSNTNSNPNNHHHNQTPSPLSLSPLSTFPPQPPSHVVSIASLPSEVAVLPARVKLSDLAPYDGAPAGPYLKAVETLSGSLTRHNAAVIELGSDDAAIIRCGFESSRLFFRSRAQAGAGKPGRGVFMYRAGRALEDCDSSPPCMSEIFKCLGKAARAALCAIARQLRLRSDVFNHLLDDTPLPANEASSSVLVATYFHSSMQNGKGAIGGGKPSINGEFEKGLLTVIASDSHGLQVCDPNGRWYLADNGLAPGSVLLLTGKALSHATAGLRPAASYRAAPDLISGSGCGGRTSLAFRLMPQSNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEDALCNHTDSTYVEQKNLNKELSLRTVLSDPLSGTFLEDAMVVSCGHSFGGLMLRKVIEASRCILCHTDIDTRTLIPNHALRAAAAAVKHEDDRRLFHNAALRKRRKEFGDLADPRRINKENCDIVADSGIQKGVQYPFSVNEKVVIKGNRRTPDKFVGKEAIITSQCLNGW

Click here to download the sequence:
Link to NCBI Protein BLAST