Transcript Information: S_Transcript_59490.p1


Annotated TAIR IDAT1G02080.1
Annotated Gene Nametranscription regulators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:373335-386682 | Forward length=2431
E-Value2.1E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3022199244047
Replicate 210.422299361525
Replicate 312.446018215927
Condition 2: 8 Hour
Replicate 113.240058282784
Replicate 213.203508215593
Replicate 313.391060090491
Condition 3: 24 Hour
Replicate 115.626462668732
Replicate 212.346910846501
Replicate 310.831552812013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59490.p1 GENE.S_Transcript_59490~~S_Transcript_59490.p1 ORF type:3prime_partial len:815 (+),score=160.57,CNOT1_TTP_bind|PF16417.1|1.1e-71,CNOT1_HEAT|PF16418.1|1.6e-32 S_Transcript_59490:342-2783(+)
ATGCAGGAATTCTCGTCGACGGTGGCCGGCCATATCCGGTTTCTTCTCCAAAGCTTGAACGGATCCAATTCTGACTCCTTGCTTCAAGACCTCTGCCAGTTCACTGATTATGGGTTGGAAGGAAGCATTCTGCTCATCCAGAGTTGTTTGGAGCACATCAATATTTATGGGACAGAAGTTAAGAATGCACAGGTGCACCCAGTTATTGGCTCACTGTTCAGATATATTCTGGATAAACAAAACTTCAGTACAGTTTTCTGTCAATCTCTAAGAAACTTGACAATGAGAGATGGATTCCTTGATGATTTATCAAAGGCCCTTGGTCTGTCACTTTGTGAAAAAATTGCAATTGGTCTTGCATTATCAGATTCAGATGATCCTGATACTAGACTGAATGGGACAAACTTCTGCATGACTCAGATTGAGGCGTTGTTTGCTAATCCCAGTACCAACAGCTCAACTGAGCAAATCCAGAATATTTTCATGTTCCTTCATCGATGTGAGGGCCTTTCAAAGCATGTAGATACTTTTACTCAGATGCTGAGCTTAATGCAGTTGAAAGAGAGTATCCCATTTGTGCTAGCTCCATTGCTTCCCGATGAACTGAATGACACCAAATTCTTGAGGAGTATGGACTTGTTTTATGGTTCTGATGAAAATGACTTTGATGCTATTGTTGCTGAAATGGAAAAGGAGATCAGTATGGCAGATGTTGTGAAGGAGCTGGGTTACGGATGCACGGCTGATGCCTCAAAATGCAAGGAAATTTTGTCTCTTTATTTACCGCTTACTGAAGTAACGATTGCTAGGATCTTGGGCACGGTAGTCCGCACTCATGCTGGTCTTGAAGACAACACGACCACATTTTCAGCATTTCTTTCAGGAATCGGTGGTAATCCCATATCTGATCTACCATCTTTGAGCTCCTGGAACGTTGATGTACTTGTCGATTCAATCAAACAGCTTGCCCCTGATACCAACTGGGTTAGAGTTATGGAGGACCTGGACCATGAGGGCTTCTACATTCCTAGTGAGGATGCCTTCACATTTTTCATGACCATTTACAAGCATGCCTGCCAGGACTCCTTTCCCCTCCATGCCATTTGTGGGTCGATTTGGAAGAATTCTGAAGGGCAGTTGTCCTTTCTCAAATATGCTGTATCAGCCCCACCTGAATTGTTTACCTTTTCACACTCTGTGAGGCAACTGGCATATGTTGATGCAGTCCATGGTTTAAAATTTCAACTTGGACAATCCAATCATGCTTGGCTGTGTCTTGATCTTTTGGATGTATTATGCCAATTGGCTGAGAGGGGTCATGCTGCTGCAGTGCAGTCAGTGCTTGAATTTCCTCTTAAGCACTGCCCTGAAGTATTGCTCCTTGGAATGGCACAGATCCATACAACATATGATCTCCTTCAGCATGAAGTCTCTTCTACTGTGCTTCCAGTGATAATTGATAATGCCAGCAGAAAAGGACTTATTCTTCACCTCTGGCACATCAATCATTATTTGGTGTTGCGTGGGTTTGTTGATGTTCTAGCTAAAGATTCAGACAACATTCACAGAATTTTAGATATTTGCCAGGAGACAAAGATTCTCAACCATGTCTTAGAGAGGATTCCTTTCTCTTTTGCCATCAGGCTGGCAGTTGATGCTTCGCAAAAGGAACTTTTAGATCTTGAAAAATGGTTGAGTGACAATATTGTTACGAGTAAAGACTCTTTTTTTGAGGAGTGCCTCAAGTATCTGAAAGATATTCAGGGCCGAACTGCCGTGGAGGATAATGCTAACAGGCTTCATCAAACTGGCGCAGCTGCTAATCTTCACTCCTCGACTGCTTTAATCATCTTAAAGACCCTTCAAGCTAATGCTCGAACCCTTACAACAAAGAGTATCTCTGATGAAATTGAAAAGCTACAGACATCTTTGGGGCATGGTGGTCTGGGTCAGCAGACTGATGGAGTTAATGATTCATCAACCTCAAATACATATTCTGAGGATATCGAGGCAGAGGCAAATTCTTACTTCCAGCGGATGTTTTCTGAACAGCTGACTATTGATGAGATGGTCCAAATGCTTTCTCGCTTCAAAGAATCCTCTGAGAAAAGGGAAAAGTCCATTTTTGAGTGCATGATTTCCAATCTTTTCGAAGAGTATAGGTTCTTTCCTAAATACCCAGAAAGACAGCTTGGACTTGCAGCTGTATTATTTGGTTCTATCATCAAGCATCAGTTGGTAACTCATCTCACTCTCGGAATTGCTCTTCGCTGTGTTCTTGATGCATTGCGTAAGCCTGCTGATTCAAAGATGTTTGCATTTGGTACCAAGGCCTTGGAGAAGTTTGTCAACCGTTTAGATGAATGGCCTCAATACTGCAACCATATCTTACAGATATCTCACCTTCGTAATACTCACCCGGAACTTGTTGTATATATCGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59490.p1 GENE.S_Transcript_59490~~S_Transcript_59490.p1 ORF type:3prime_partial len:815 (+),score=160.57,CNOT1_TTP_bind|PF16417.1|1.1e-71,CNOT1_HEAT|PF16418.1|1.6e-32 S_Transcript_59490:342-2783(+)
MQEFSSTVAGHIRFLLQSLNGSNSDSLLQDLCQFTDYGLEGSILLIQSCLEHINIYGTEVKNAQVHPVIGSLFRYILDKQNFSTVFCQSLRNLTMRDGFLDDLSKALGLSLCEKIAIGLALSDSDDPDTRLNGTNFCMTQIEALFANPSTNSSTEQIQNIFMFLHRCEGLSKHVDTFTQMLSLMQLKESIPFVLAPLLPDELNDTKFLRSMDLFYGSDENDFDAIVAEMEKEISMADVVKELGYGCTADASKCKEILSLYLPLTEVTIARILGTVVRTHAGLEDNTTTFSAFLSGIGGNPISDLPSLSSWNVDVLVDSIKQLAPDTNWVRVMEDLDHEGFYIPSEDAFTFFMTIYKHACQDSFPLHAICGSIWKNSEGQLSFLKYAVSAPPELFTFSHSVRQLAYVDAVHGLKFQLGQSNHAWLCLDLLDVLCQLAERGHAAAVQSVLEFPLKHCPEVLLLGMAQIHTTYDLLQHEVSSTVLPVIIDNASRKGLILHLWHINHYLVLRGFVDVLAKDSDNIHRILDICQETKILNHVLERIPFSFAIRLAVDASQKELLDLEKWLSDNIVTSKDSFFEECLKYLKDIQGRTAVEDNANRLHQTGAAANLHSSTALIILKTLQANARTLTTKSISDEIEKLQTSLGHGGLGQQTDGVNDSSTSNTYSEDIEAEANSYFQRMFSEQLTIDEMVQMLSRFKESSEKREKSIFECMISNLFEEYRFFPKYPERQLGLAAVLFGSIIKHQLVTHLTLGIALRCVLDALRKPADSKMFAFGTKALEKFVNRLDEWPQYCNHILQISHLRNTHPELVVYIE

Click here to download the sequence:
Link to NCBI Protein BLAST