Transcript Information: S_Transcript_5953.p1


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value1.1E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2051039149384
Replicate 215.775466108482
Replicate 313.903720726238
Condition 2: 8 Hour
Replicate 122.209344319916
Replicate 213.736083232164
Replicate 316.401053727149
Condition 3: 24 Hour
Replicate 18.9982810233276
Replicate 213.621772760913
Replicate 312.545680118607


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5953.p1 GENE.S_Transcript_5953~~S_Transcript_5953.p1 ORF type:complete len:386 (+),score=45.56,Copine|PF07002.12|1.4e-71 S_Transcript_5953:391-1548(+)
ATGAACCCTAGTCATACTCACAAAATCAAGCAGCTGCCGAAATTTATAGGTGACAATTTCTGTTCAGTCGATCAGGTTACAGAAGCTCTCAGGGAAGCTGGCCTCGAATCATCAAACCTAATTCTTGGCATTGACTTCACAAAGAGCAATGAATGGATGGGGAAGTATTCATTTAATAGGAGAAGTTTGCATGCAATTGGTCGTGATCCAAATCCTTATGAGCAAGCTATTTCTATAATTGGCCGAACTTTATCGCCATTTGACGAAGACAACCTGATACCTTGTTTTGGATTTGGTGATGTAACAACGCGTGACAAGCATGTTTTTAGCTTCTATGCTGATCACCGGCCTTGCGATGGTTTTGAGGAAGCACTTGTGCGATACAAAGAAACTGTTCCCCGTATCAACCTATCAGGCCCTACATCATTCGCCCCTGTAATAGATGCAGCGATTGACATAGTGGAAAGTAACAACAGACAATATCATGTTCTAGTCATCATAGCAGATGGACAGGTCACTAGGCCCCCTGGTTTACCACCTGGAATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTTGCTGCCAGCCACTGTCCTCTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATCATGTCCGAGAACAAGAGTATGTCGAAGAAGGAGGCAGCTTTCGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAAAAAAAAGTGAGCCACTTTCATAGTAAGCCTCTTCCTCCTCCACGTGAAGTGATAGCTTATGATAATTCTAAAAGATCTGCCGCACACATGACAAGTTCATCCTCTATAGAAGTGATGTATTATGATAATTCTAAGAGATCTGTTGCACACACGACACGTTCATCCTCTGTAGAACCGCCTGCTCCAATAGAAGCCAATGCTTCTGTAGACCAGGTATGTCCAATTTGCTTGACAAATCCGAAGAACATGGCATTTGGTTGTGGTCATCTGGTAAGTCTATCTTTATGCCTTTCTCTTCATTACTATATAATCTTAGTAGAACCTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5953.p1 GENE.S_Transcript_5953~~S_Transcript_5953.p1 ORF type:complete len:386 (+),score=45.56,Copine|PF07002.12|1.4e-71 S_Transcript_5953:391-1548(+)
MNPSHTHKIKQLPKFIGDNFCSVDQVTEALREAGLESSNLILGIDFTKSNEWMGKYSFNRRSLHAIGRDPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDVTTRDKHVFSFYADHRPCDGFEEALVRYKETVPRINLSGPTSFAPVIDAAIDIVESNNRQYHVLVIIADGQVTRPPGLPPGMLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENKSMSKKEAAFALAALMEIPLQYRATQTPEFIKKKVSHFHSKPLPPPREVIAYDNSKRSAAHMTSSSSIEVMYYDNSKRSVAHTTRSSSVEPPAPIEANASVDQVCPICLTNPKNMAFGCGHLVSLSLCLSLHYYIILVEPK*

Click here to download the sequence:
Link to NCBI Protein BLAST