Transcript Information: S_Transcript_5954.p3


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value1.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47102657053417
Replicate 21.3667214770142
Replicate 30.65284021534869
Condition 2: 8 Hour
Replicate 10.94360134146606
Replicate 20.19798096141351
Replicate 31.3204507365918
Condition 3: 24 Hour
Replicate 10.77327021205643
Replicate 20.60169411264639
Replicate 30.66961179836591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5954.p3 GENE.S_Transcript_5954~~S_Transcript_5954.p3 ORF type:complete len:113 (+),score=17.17,Copine|PF07002.12|1.6e-27 S_Transcript_5954:1437-1775(+)
ATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTTGCTGCCAGCCACTGTCCTCTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATCATGTCCGAGAACAAGAGTATGTCGAAGAAGGAGGCAGCTTTCGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAGTATGGCTGGAACCCTGGAACTGTAAAAAAAATTATCTTTGTGTTTTTAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5954.p3 GENE.S_Transcript_5954~~S_Transcript_5954.p3 ORF type:complete len:113 (+),score=17.17,Copine|PF07002.12|1.6e-27 S_Transcript_5954:1437-1775(+)
MLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENKSMSKKEAAFALAALMEIPLQYRATQTPEFIKYGWNPGTVKKIIFVFLT*

Click here to download the sequence:
Link to NCBI Protein BLAST