Transcript Information: S_Transcript_59543.p1


Annotated TAIR IDAT5G51340.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20863594-20867171 | Forward length=726
E-Value8.3e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3595627487516
Replicate 26.8026934469004
Replicate 35.7121252036707
Condition 2: 8 Hour
Replicate 18.8855792988054
Replicate 29.7876837798804
Replicate 39.0000245443255
Condition 3: 24 Hour
Replicate 16.887206322729
Replicate 26.169593151339
Replicate 35.7099906083805


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59543.p1 GENE.S_Transcript_59543~~S_Transcript_59543.p1 ORF type:complete len:720 (+),score=148.26,Cohesin_load|PF10345.5|2.6e-16,TPR_2|PF07719.13|0.23,TPR_2|PF07719.13|1e+03,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|1.4,TPR_2|PF07719.13|33,TPR_2|PF07719.13|9.7e+03,TPR_12|PF13424.2|2.3e+02,TPR_12|PF13424.2|5.8,TPR_12|PF13424.2|2.8e+02,TPR_12|PF13424.2|3.6e+02,TPR_12|PF13424.2|1.1e+02,TPR_12|PF13424.2|2.3e-05 S_Transcript_59543:223-2382(+)
ATGGATGCACTAGCAGAAGGACTATGGGGGTTAGCAGACCACCATGAGCAAAAAGGTGAGATTGCCAAAGCCATCAAATGCTTGGAAGCAATTTGTCAAAGCCCAGTTTCTTTCCTTCCTATTATTGAAGTCAAAACTCGTCTTCGAATCGCCACTCTCTTGTTAAAACACTGCCATAATGTCAATCATGCTAAATCCCATCTTGAACGCTCTCAACTTCTGTTGAAGTCGATCCCGTCATGTTTTGAGTTGAAATGTAGAGCATACAGCTTGCTTAGCCAATGTTACCATCTTGTTGGGGCTATTCCCTCTCAGAAGCAGGTTTTGAATAAGGGTTTGGAGCTTGCACAGTCATTTACTGATAGGTTTGTCGCAAATTTATGGTACTGCAACTTCAGTTCACAGCTTGCAAGTTGTTTAATAATTGAAGGCGATTATCAAAATTCACTTATTGCTCTTGAGCATGGATACAATTCTGCTGCCGACATATGTTATCCAGAACTGCAGATGTTTTTTGCAACTTCAATACTGCACGTCAATCTGATGCAATGGGGTGATTTAAGCATGGTGGAAAGAGCTCTTGTGAATTGTGATGAGGTGTGGGAGTCACTTGATGTGAATAAGAGGCAACGATGCCTTGGTTTGCTCTTCTATAATGAGCTGCTGCACATTTTCTATCGGCTTCGTATATGCGACTACAAAAATGTTGCTCAACACATTGACAAGTTGGATACTGCTATGAAGGCCGACATGCAGCGGACGGAACGTTTGAGGGAGCTGATCAATGAACTTAATTCCTTAAATCAAAGTATTAACCAGCCTAATTTGAGGCATAGAGATCGTGTAGCGCTGAGTGATAAACGTGCTGAGCTTCAGCAGCAACTATGTAATATAACTGGAGCGAGTTCCATTGGGCAGGAGTATACCGACACAGAACATTTTAGGAACTCATATGGTGATAAGCTTGAACTGGCACCATCACCCATCAATGGGGAATGGCTGTCTAAGAGTGCTGTTTATGCTTTGGTAGATCTTATAGTCGTAATTGTTGGACGTCCAAAAGGGCATTTTAAGGAGTGTGGAAAGCGCATTCAATCTGGAATTCAAACTATCCAAGTGGAGCTATCAAGGCTCGGAATCACTGATGGTGTCAGAGAGGTAGATTTGCAGCACTCTGCTATTTGGATGGCTGGTGTTTACTTGATGCTGTTGATTCAATTCCTTGAAAACAAGGTCGCTGTGGATCTCACACGAGCTGATTTTGTTGAAGCACAAGAGGCTTTGGTGCAGATGAGAAGTTGGTATACCCGTTTCCCCACTATCTTACAGGCATGTGAAAGCATAATTGAAATGCTTAGAGGACAATATGCTCATTCTGTAGGCTGCTTTGATGAGGCGGCTTTTCATTTTGTTGAAGCAGCAAAGCTGACAGAGAGCAAGTCAGTACAAGCTATCTGTCAAGTATATGCAGCTGTTTCTTACATATGTATTGGAGATGCTGAGTCTTCATCACAGGCACTCGACTTAATAGGCCCAGTTTACAGGGTTATAGATTCATTTATTGGGGCCCGTGAGCAAACAAGTGTCCTTTTTGCCTATGGTCTTTTGTTAATGAAGCAGCAAAATCTTCAGGAGGCACGGATTCGTCTGGCAACTGGCTTGCAAATAACACATAATCAGTTGGGAAATCTTCAATTGGTTTCACAGTTTCTCACCATTCTTGGGAGTTTGGCACTTGCTCTTCATGACACTGCACAAGCTCGAGAAATTTTGAGGTCTGCCTTAACATTGGCAAAGAAGCTTGGTGACATGCCAACTCAGATCTGGGTGCTCTCTTCTCTGACAGCATTGTATCAGGAGTTGGGTGAGAGAGGCAATGAGATGGAGAATACCGAGTATCAAAGAAAGAAGGCAGATGAGCTGCATAAAAGACTTGCTGATGCTTATGCATCTATTCATCACATTGAGTTAATTAGCAAAGTGAAAATTGAAGTTCAGCAGTTGCATGGATATGATGTCAAACGAGAAGTGGCAAGCTCGTCCATGAGGATAAATCTTGATATCCCAGAGTCTGTTGGCCTGGCTACTTCACAACCTGTTGTGTCAACCTCAAGGCTTGTTGATTTCGATCCTGGAAGGCGTGGGAAGAGGAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59543.p1 GENE.S_Transcript_59543~~S_Transcript_59543.p1 ORF type:complete len:720 (+),score=148.26,Cohesin_load|PF10345.5|2.6e-16,TPR_2|PF07719.13|0.23,TPR_2|PF07719.13|1e+03,TPR_2|PF07719.13|2.1,TPR_2|PF07719.13|1.4,TPR_2|PF07719.13|33,TPR_2|PF07719.13|9.7e+03,TPR_12|PF13424.2|2.3e+02,TPR_12|PF13424.2|5.8,TPR_12|PF13424.2|2.8e+02,TPR_12|PF13424.2|3.6e+02,TPR_12|PF13424.2|1.1e+02,TPR_12|PF13424.2|2.3e-05 S_Transcript_59543:223-2382(+)
MDALAEGLWGLADHHEQKGEIAKAIKCLEAICQSPVSFLPIIEVKTRLRIATLLLKHCHNVNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLVGAIPSQKQVLNKGLELAQSFTDRFVANLWYCNFSSQLASCLIIEGDYQNSLIALEHGYNSAADICYPELQMFFATSILHVNLMQWGDLSMVERALVNCDEVWESLDVNKRQRCLGLLFYNELLHIFYRLRICDYKNVAQHIDKLDTAMKADMQRTERLRELINELNSLNQSINQPNLRHRDRVALSDKRAELQQQLCNITGASSIGQEYTDTEHFRNSYGDKLELAPSPINGEWLSKSAVYALVDLIVVIVGRPKGHFKECGKRIQSGIQTIQVELSRLGITDGVREVDLQHSAIWMAGVYLMLLIQFLENKVAVDLTRADFVEAQEALVQMRSWYTRFPTILQACESIIEMLRGQYAHSVGCFDEAAFHFVEAAKLTESKSVQAICQVYAAVSYICIGDAESSSQALDLIGPVYRVIDSFIGAREQTSVLFAYGLLLMKQQNLQEARIRLATGLQITHNQLGNLQLVSQFLTILGSLALALHDTAQAREILRSALTLAKKLGDMPTQIWVLSSLTALYQELGERGNEMENTEYQRKKADELHKRLADAYASIHHIELISKVKIEVQQLHGYDVKREVASSSMRINLDIPESVGLATSQPVVSTSRLVDFDPGRRGKRKI*

Click here to download the sequence:
Link to NCBI Protein BLAST