Transcript Information: S_Transcript_5957.p1


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value6E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.627568997103
Replicate 26.743050963959
Replicate 37.8616488935456
Condition 2: 8 Hour
Replicate 19.8908646779196
Replicate 215.834230672621
Replicate 311.486555947993
Condition 3: 24 Hour
Replicate 116.983957673652
Replicate 29.1748942306393
Replicate 312.036257115578


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5957.p1 GENE.S_Transcript_5957~~S_Transcript_5957.p1 ORF type:complete len:373 (+),score=51.29,Copine|PF07002.12|1.3e-71 S_Transcript_5957:391-1509(+)
ATGAACCCTAGTCATACTCACAAAATCAAGCAGCTGCCGAAATTTATAGGTGACAATTTCTGTTCAGTCGATCAGGTTACAGAAGCTCTCAGGGAAGCTGGCCTCGAATCATCAAACCTAATTCTTGGCATTGACTTCACAAAGAGCAATGAATGGATGGGGAAGTATTCATTTAATAGGAGAAGTTTGCATGCAATTGGTCGTGATCCAAATCCTTATGAGCAAGCTATTTCTATAATTGGCCGAACTTTATCGCCATTTGACGAAGACAACCTGATACCTTGTTTTGGATTTGGTGATGTAACAACGCGTGACAAGCATGTTTTTAGCTTCTATGCTGATCACCGGCCTTGCGATGGTTTTGAGGAAGCACTTGTGCGATACAAAGAAACTGTTCCCCGTATCAACCTATCAGGCCCTACATCATTCGCCCCTGTAATAGATGCAGCGATTGACATAGTGGAAAGTAACAACAGACAATATCATGTTCTAGTCATCATAGCAGATGGACAGGTCACTAGGCCCCCTGGTTTACCACCTGGAATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTTGCTGCCAGCCACTGTCCTCTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATCATGTCCGAGAACAAGAGTATGTCGAAGAAGGAGGCAGCTTTCGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAAAAAAAAGTGAGCCACTTTCATAGTAAGCCTCTTCCTCCTCCACGTGAAGTGATAGCTTATGATAATTCTAAAAGATCTGCCGCACACATGACAAGTTCATCCTCTATAGAAGTGATGTATTATGATAATTCTAAGAGATCTGTTGCACACACGACACGTTCATCCTCTGTAGAACCGCCTGCTCCAATAGAAGCCAATGCTTCTGTAGACCAGGTAAGGCTGTATATCTTTGATCCTCTCCATCTGGGATCAATCCTTCTCACAACTGGAATTGTGGTTCTTACTCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5957.p1 GENE.S_Transcript_5957~~S_Transcript_5957.p1 ORF type:complete len:373 (+),score=51.29,Copine|PF07002.12|1.3e-71 S_Transcript_5957:391-1509(+)
MNPSHTHKIKQLPKFIGDNFCSVDQVTEALREAGLESSNLILGIDFTKSNEWMGKYSFNRRSLHAIGRDPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDVTTRDKHVFSFYADHRPCDGFEEALVRYKETVPRINLSGPTSFAPVIDAAIDIVESNNRQYHVLVIIADGQVTRPPGLPPGMLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENKSMSKKEAAFALAALMEIPLQYRATQTPEFIKKKVSHFHSKPLPPPREVIAYDNSKRSAAHMTSSSSIEVMYYDNSKRSVAHTTRSSSVEPPAPIEANASVDQVRLYIFDPLHLGSILLTTGIVVLTP*

Click here to download the sequence:
Link to NCBI Protein BLAST