Transcript Information: S_Transcript_5959.p1


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.484902962575
Replicate 230.349283288037
Replicate 328.7464243181
Condition 2: 8 Hour
Replicate 141.849827007331
Replicate 234.450546262114
Replicate 340.029760760528
Condition 3: 24 Hour
Replicate 128.408604351618
Replicate 227.345537911368
Replicate 331.142712105848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5959.p1 GENE.S_Transcript_5959~~S_Transcript_5959.p1 ORF type:complete len:213 (+),score=25.52,Copine|PF07002.12|5.9e-27,zf-C3HC4_3|PF13920.2|3.3e-11,zf-C3HC4_2|PF13923.2|1.3e-06 S_Transcript_5959:1437-2075(+)
ATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTTGCTGCCAGCCACTGTCCTCTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATCATGTCCGAGAACAAGAGTATGTCGAAGAAGGAGGCAGCTTTCGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAAAAAAAAGTGAGCCACTTTCATAGTAAGCCTCTTCCTCCTCCACGTGAAGTGATAGCTTATGATAATTCTAAAAGATCTGCCGCACACATGACAAGTTCATCCTCTATAGAAGTGATGTATTATGATAATTCTAAGAGATCTGTTGCACACACGACACGTTCATCCTCTGTAGAACCGCCTGCTCCAATAGAAGCCAATGCTTCTGTAGACCAGGTATGTCCAATTTGCTTGACAAATCCGAAGAACATGGCATTTGGTTGTGGTCATCTGACTTGCAAGGATTGTGGAGAAACACTGCCAGCATGTCCTCTGTGTCGGAAGCCCATTACTACACGCGTCAAATTGTATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5959.p1 GENE.S_Transcript_5959~~S_Transcript_5959.p1 ORF type:complete len:213 (+),score=25.52,Copine|PF07002.12|5.9e-27,zf-C3HC4_3|PF13920.2|3.3e-11,zf-C3HC4_2|PF13923.2|1.3e-06 S_Transcript_5959:1437-2075(+)
MLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENKSMSKKEAAFALAALMEIPLQYRATQTPEFIKKKVSHFHSKPLPPPREVIAYDNSKRSAAHMTSSSSIEVMYYDNSKRSVAHTTRSSSVEPPAPIEANASVDQVCPICLTNPKNMAFGCGHLTCKDCGETLPACPLCRKPITTRVKLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST