Transcript Information: S_Transcript_5960.p1


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value1.1E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1191.77489980988
Replicate 2131.70816796456
Replicate 3145.30640550716
Condition 2: 8 Hour
Replicate 1131.95893038662
Replicate 2128.80761338024
Replicate 3121.95248569153
Condition 3: 24 Hour
Replicate 195.455521192233
Replicate 2121.97251321089
Replicate 3115.4099607628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5960.p1 GENE.S_Transcript_5960~~S_Transcript_5960.p1 ORF type:complete len:165 (+),score=30.16,Ribosomal_L21e|PF01157.14|8.9e-44 S_Transcript_5960:147-641(+)
ATGCCGGCAGGTCATGGATTAAGAGCAAGAACAAGGGATCTATTTGCAAGGGGATTCCGTAGAAAGGGTACAATCCCAATCTCAGTGTACTTGCGAACATTCCATGTTGGTGACTATGTTGATATCAAGGTTAATGGTGCTATTCACAAGGGTATGCCCCACAAGTTCTACCATGGCCGCACTGGTCGCGTCTGGAATGTCACCAAACGCGCCATTGGTGTTGAGGTCAACAAGCAGGTTGGCAATAGAATCATCGCTAAAAGGATTCACGTCCGCATTGAGCACGTTCAGCCTTCCAGGTGTAATGAGGACTTCAAGCTCAGAGTGAAAAAGAATGACGAGTTGAAGGCAGCTGCCAAGGCCAGGGGTGAGGTAATTAGCACTAAGAGGCAGCCTGAGGGACCCAAGCCTGGTTTCATGGTTGACGGTGCTACCATTGAGACTGTTACTCCTATCCCATACGATGTCACCAATGATCTCAAGGGTGGATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5960.p1 GENE.S_Transcript_5960~~S_Transcript_5960.p1 ORF type:complete len:165 (+),score=30.16,Ribosomal_L21e|PF01157.14|8.9e-44 S_Transcript_5960:147-641(+)
MPAGHGLRARTRDLFARGFRRKGTIPISVYLRTFHVGDYVDIKVNGAIHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIAKRIHVRIEHVQPSRCNEDFKLRVKKNDELKAAAKARGEVISTKRQPEGPKPGFMVDGATIETVTPIPYDVTNDLKGGY*

Click here to download the sequence:
Link to NCBI Protein BLAST