Transcript Information: S_Transcript_5962.p1


Annotated TAIR IDAT1G57660.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21355567-21356364 | Forward length=164
E-Value3.8E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.402899448009
Replicate 254.205991585274
Replicate 352.784382584098
Condition 2: 8 Hour
Replicate 139.709347487075
Replicate 241.85078581742
Replicate 345.755569427934
Condition 3: 24 Hour
Replicate 132.767325235891
Replicate 242.39695786265
Replicate 339.789949363244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5962.p1 GENE.S_Transcript_5962~~S_Transcript_5962.p1 ORF type:internal len:116 (+),score=18.13,Ribosomal_L21e|PF01157.14|3.9e-35 S_Transcript_5962:1-345(+)
GAAAACCCTAAAACCAAGCTAGGGCTTCATTCTCTAGCAGCTTGTTGCAACCCACAGAGAGAGAGCCGAGAGAGGAGAGAGGAAAAAAAAAGCAGAGCAAAAATGCCGGCAGGTCATGGGTTGAGAGCAAGAACAAGGGATCTGTTCGCAAGGGGGTTCCGTAGAAAGGGTACAATTCCAATCTCAGTTTACTTGAGAACATACCATGTTGGTGATTATGTTGATATCAAGGTTAATGGCGCTGTTCACAAGGGTATGCCCCACAAGTTCTACCATGGCCGCACTGGTCGCGTCTGGAATGTCACCAAACGCGCCATTGGTGTTGAGGTCAACAAGCAGGTTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5962.p1 GENE.S_Transcript_5962~~S_Transcript_5962.p1 ORF type:internal len:116 (+),score=18.13,Ribosomal_L21e|PF01157.14|3.9e-35 S_Transcript_5962:1-345(+)
ENPKTKLGLHSLAACCNPQRESRERREEKKSRAKMPAGHGLRARTRDLFARGFRRKGTIPISVYLRTYHVGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVG

Click here to download the sequence:
Link to NCBI Protein BLAST