Transcript Information: S_Transcript_59644.p1


Annotated TAIR IDAT1G26520.1
Annotated Gene NameCobalamin biosynthesis CobW-like protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9163448-9165594 | Reverse length=374
E-Value4.2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9549731952985
Replicate 210.671675383798
Replicate 38.4195099512089
Condition 2: 8 Hour
Replicate 113.676065529466
Replicate 214.590336069387
Replicate 315.871038705883
Condition 3: 24 Hour
Replicate 113.653052181621
Replicate 211.701424455179
Replicate 310.966106263094


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59644.p1 GENE.S_Transcript_59644~~S_Transcript_59644.p1 ORF type:5prime_partial len:184 (+),score=40.33,CobW_C|PF07683.10|3.7e-17 S_Transcript_59644:2-553(+)
GCGGATGTTGTTATACTTAACAAGGTTGATTTGATTTCTCCTGAGGATCCTGAAGGTACTCTGAAGGATCTGGAGAAGAAGATACAAAAGATTAATTCTCTTGCAAATATCATCAGGACAGTTCGTTGTCAAGTTGACTTGTCCGAGATATTGGATTGCCGTGCCTATGATGCCACACATGCTACTCATTTGGAAGCACTACTAGAAGAAAACAAGTCTTTATCTACTGGTGATCTTCATGACATTAGTGTGAGAACCCTTTGTATCTCGGAGTCACAAGTTGTTTCTCTTGAGAAGGTTCGCTTATGGCTGGAGGAGATTCTTTGGGACAAGAAATGTGGCATGGATGTCTACCGTTGTAAAGGAGTATTAAGCATGGTAGGTTCGGATGAACTTCATACTTTGCAGGCTGTAAGAGAGATATATGATATTGTTCCCTCTCGTGCATGGAGAGCAGAAGAAAACCGGATAAACAGAATAGTCTTCATTGGTCAAAATTTGGATGAGAATGTTTTGGTTGAATCCTTCAAAACCTGTAGATTGTCTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59644.p1 GENE.S_Transcript_59644~~S_Transcript_59644.p1 ORF type:5prime_partial len:184 (+),score=40.33,CobW_C|PF07683.10|3.7e-17 S_Transcript_59644:2-553(+)
ADVVILNKVDLISPEDPEGTLKDLEKKIQKINSLANIIRTVRCQVDLSEILDCRAYDATHATHLEALLEENKSLSTGDLHDISVRTLCISESQVVSLEKVRLWLEEILWDKKCGMDVYRCKGVLSMVGSDELHTLQAVREIYDIVPSRAWRAEENRINRIVFIGQNLDENVLVESFKTCRLSC*

Click here to download the sequence:
Link to NCBI Protein BLAST