Transcript Information: S_Transcript_5967.p1


Annotated TAIR IDAT1G57660.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21355567-21356364 | Forward length=164
E-Value1.3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.28034007216
Replicate 263.335421747004
Replicate 358.66697943835
Condition 2: 8 Hour
Replicate 157.17410679852
Replicate 252.650988609012
Replicate 355.678464002667
Condition 3: 24 Hour
Replicate 138.981817953043
Replicate 251.384331418788
Replicate 346.095460464523


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5967.p1 GENE.S_Transcript_5967~~S_Transcript_5967.p1 ORF type:internal len:116 (+),score=19.52,Ribosomal_L21e|PF01157.14|1.4e-35 S_Transcript_5967:1-345(+)
GAAAACCCTAAAACCAAGCTAGGGCTTCATTCTCTAGCAGCTCGTTGCAACCCACAGAGAGCCGAGAGAAGAGAGAGAGAGAGAGAAAAAAGCAGAGCAAAAATGCCGGCAGGTCATGGGTTGAGAGCAAGAACAAGGGATCTATTCGCAAGGGGGTTCCGTAAAAAGGGTACAATCCCAATCTCAGTTTACTTGAGAACATACCATGTTGGTGATTATGTTGATATCAAGGTTAATGGCGCTGTTCACAAGGGTATGCCCCACAAGTTCTACCATGGCCGCACTGGTCGCGTCTGGAATGTCACCAAACGCGCCATTGGTGTTGAGGTCAACAAGCAGGTTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5967.p1 GENE.S_Transcript_5967~~S_Transcript_5967.p1 ORF type:internal len:116 (+),score=19.52,Ribosomal_L21e|PF01157.14|1.4e-35 S_Transcript_5967:1-345(+)
ENPKTKLGLHSLAARCNPQRAERREREREKSRAKMPAGHGLRARTRDLFARGFRKKGTIPISVYLRTYHVGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVG

Click here to download the sequence:
Link to NCBI Protein BLAST