Transcript Information: S_Transcript_59687.p1


Annotated TAIR IDAT5G25150.1
Annotated Gene NameTBP-associated factor 5
Annotated Gene Symbol(s)TAF5
Annotation TypeOrtholog
Chromosome Positionchr5:8677117-8682058 | Forward length=669
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.799646178056
Replicate 218.413058349044
Replicate 314.924598648875
Condition 2: 8 Hour
Replicate 122.310616993483
Replicate 221.338275900782
Replicate 321.093476616554
Condition 3: 24 Hour
Replicate 115.170962304943
Replicate 215.773472438382
Replicate 315.975214414567


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59687.p1 GENE.S_Transcript_59687~~S_Transcript_59687.p1 ORF type:complete len:671 (+),score=128.90,TFIID_NTD2|PF04494.11|9.9e-46,WD40|PF00400.28|0.021,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|1.2e-06,WD40|PF00400.28|6.6e-07,WD40|PF00400.28|8.5e-07,WD40|PF00400.28|1.3e-07,Ge1_WD40|PF16529.1|10,Ge1_WD40|PF16529.1|8.6,Ge1_WD40|PF16529.1|1.9,Ge1_WD40|PF16529.1|5.3 S_Transcript_59687:193-2205(+)
ATGGAGGAAGAAGAAATAGAGAAAGCTGTGATAGCATATCTCAAGAAGAAAGGGTTCAAGCAAACTCAACTTGCTTTCCAAGAAGAGCAACAACAACAATCCAAGAATTCTTCTTCAAATTCCCAAACTGACCCTGATGTTGCCAAGCTCATCCTCTCCTTTTCCTCTGAGTTAGAGAGTCTCCCTGCTCAATATCATGATGGATATAGCAAGCTACGATCATGGGCCTATAATTCCCTGGATTTGTATAAGCATGAATTGCTCCGAGTGCTTTATCCAGTATTTATACATTGTTTCATGGATCTCGTGGCAAAGGGCCACCTTCAGGAAGCTCGTAATTTCTTTAATACCTTCCGTGAAGACCATGAGACTATGCATCAGAGAGACCTGCAAAAGTTGGAAGGAGTTCTTTCCCCGTCTCATTTAGAGGAAATGGAGTTTGCCCACACATTAAGGCAGAGCAAAGTTAACATCAAAATCTGTCAGTACTCTTATGAACTTCTCCTCCAGTATCTACACAATACACAGTCAATCACAATGCTAGGAGTTATTAATGAACACATCAACTTCCAAGTTTTTCCAGGTCAGCCTAGTTCAATATCTGATGATGCTGACGCTGTGACCCTAGTTGGTGGTGGCCAGGATGCAGTAAACCTGATCAACCAGAAAGAAATTCAATGGGGGATGCTGGAAGATTCACTAGAGGATCGCTTGGAGAAGGCAGGGGGTTTGCTTTCAGATTCAGAAAAGGTAGATGGTGAAATCAAGGAAGGGGAGAATGAAGAAAACAAGAAAAGATCTGCTGATGGAGGGAAACAAGGTGCATCTGTCAAGAAGTCTAAGAAGGAAAAAGTTGGGGGCGCTGGTGGTAAATCTTCACGGCCTGAGGCTAACCCTCCATCTGTGGCACCAAGAGTCAAACCAGAGCTTAGTTTGCCCATAATACCAACTGAAGTAGAACATTCTATCCTGGAAGACCTTCGCAATCGTGTGCAGCTGAGCAGTGTGGCCCTGCCTTCAGTGAGCTTCTACACATTTATCAATACTCACAATGGGCTGAACTGTGCATCAATATCACATGATGGGTCCTTGGTTGCTGGTGGATTTTCTGACTCCTCACTAAAGATATGGGACATGGCAAAAATTGGACAACAAAACAGCAGCTCTCCTCTGCAGGGTGAAAAGGATACAGCTAATGATGAACATACGCTGAATGCAAATGGCAACAAAAGACCCTACACATTATTTCAGGGCCATTCTGGACCTGTCTATTCAGCTTCATTTAGCCCACTTGGGGATTTTGTTCTCTCTTCCTCAGCAGACTCAACAGTAAGACTATGGAGCACCAAGCTAAATGCCAATCTTGTGTGCTACAAGGGTCATAATTATCCTGTATGGGATGTACAGTTCAGTCCTTTTGGACATTATTTTGCTAGCTGCTCCCATGATAGAACAGCGAGGATATGGTCCATGGACAGAATACAGCCCCTGAGAATCATGGCTGGGCATTTATCAGATGTTGATTGTGTCAGGTGGCATGTAAACTGTAACTACATAGCTACTGGATCTAGTGATAAAACCGTGCGTTTATGGGACATACAGAGCGGGGAATGTGTCAGGATATTCATTGGTCACAGGAGTATGATCTTGTCCTTGGCGATGTCGCCTGATGGTCGTTACATGGCATCTGGTGATGAAGATGGTGCAATTATGATGTGGGATCTTGCTAGTGGTCGGTGTATTACCCCTTTGGTTGGTCACACATCATGTGTATGGACATTAGCTTTCAGCGGGGAAAGCTCTCTTCTTGCCTCTGGGTCAGCTGATTGCACAGTAAAACTGTGGGATGTGAATGCAAGTACAAAATTTTTAAGGACCGAGGAAAAGAGCGGGAGCTCCAATCGACTGAGATCTGTGAAGACTCTGCTGACAAAGTCCACGCCAGTTTACTCTCTGACGTTCTCCAGGAGAAATCTGTTATTTGGAGCTGGGGTTCTTTCTAGAATGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59687.p1 GENE.S_Transcript_59687~~S_Transcript_59687.p1 ORF type:complete len:671 (+),score=128.90,TFIID_NTD2|PF04494.11|9.9e-46,WD40|PF00400.28|0.021,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|1.2e-06,WD40|PF00400.28|6.6e-07,WD40|PF00400.28|8.5e-07,WD40|PF00400.28|1.3e-07,Ge1_WD40|PF16529.1|10,Ge1_WD40|PF16529.1|8.6,Ge1_WD40|PF16529.1|1.9,Ge1_WD40|PF16529.1|5.3 S_Transcript_59687:193-2205(+)
MEEEEIEKAVIAYLKKKGFKQTQLAFQEEQQQQSKNSSSNSQTDPDVAKLILSFSSELESLPAQYHDGYSKLRSWAYNSLDLYKHELLRVLYPVFIHCFMDLVAKGHLQEARNFFNTFREDHETMHQRDLQKLEGVLSPSHLEEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTQSITMLGVINEHINFQVFPGQPSSISDDADAVTLVGGGQDAVNLINQKEIQWGMLEDSLEDRLEKAGGLLSDSEKVDGEIKEGENEENKKRSADGGKQGASVKKSKKEKVGGAGGKSSRPEANPPSVAPRVKPELSLPIIPTEVEHSILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCASISHDGSLVAGGFSDSSLKIWDMAKIGQQNSSSPLQGEKDTANDEHTLNANGNKRPYTLFQGHSGPVYSASFSPLGDFVLSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHVNCNYIATGSSDKTVRLWDIQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGAIMMWDLASGRCITPLVGHTSCVWTLAFSGESSLLASGSADCTVKLWDVNASTKFLRTEEKSGSSNRLRSVKTLLTKSTPVYSLTFSRRNLLFGAGVLSRMS*

Click here to download the sequence:
Link to NCBI Protein BLAST