Transcript Information: S_Transcript_59713.p1


Annotated TAIR IDAT2G03870.2
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1180306-1181256 | Forward length=99
E-Value2.4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 160.161511883166
Replicate 242.119870973437
Replicate 338.003213748025
Condition 2: 8 Hour
Replicate 153.119608608131
Replicate 250.980697506286
Replicate 345.602995179142
Condition 3: 24 Hour
Replicate 147.926350446031
Replicate 243.40463307955
Replicate 344.176792927749


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59713.p1 GENE.S_Transcript_59713~~S_Transcript_59713.p1 ORF type:5prime_partial len:165 (+),score=18.81,LSM|PF01423.18|1.8e-20 S_Transcript_59713:3-497(+)
AACTTCCAACAGCTGAATTTTTTTTGTACATATATGATAAAGTATAAACAAAACAAAACACAGAGTGAATTTCTGTGTTCGGTCTCTCAGTTCGTGTCCAAGCACAGTACTTCTCCACCGAGTTCACTACAGAGGTCTGACCTCAACAATTACACAGTTATCTTCATACTTGCTGGCGTAAACCGGATAACTATCATGTCTAGCCGCAAAGAAACAGTTCTAGATCTTGCCAAGTTTGTTGACAAGGGGGTCCAAGTCAAACTTACTGGAGGAAGACAAGTTACTGGAACATTGAAGGGATATGATCAGTTGCTGAACCTTGTCCTAGATGAAGCCATTGAATATCTGAGAGATCCTGATGACCCATTGAAGACTACCGACCAGACTAGACGACTTGGCTTAATTGTATGTAGAGGAACCGCGGTGATGCTTGTTTCCCCTACTGATGGCACAGATGAGATCGCAAACCCTTTCATTCAGCCAGAAGGAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59713.p1 GENE.S_Transcript_59713~~S_Transcript_59713.p1 ORF type:5prime_partial len:165 (+),score=18.81,LSM|PF01423.18|1.8e-20 S_Transcript_59713:3-497(+)
NFQQLNFFCTYMIKYKQNKTQSEFLCSVSQFVSKHSTSPPSSLQRSDLNNYTVIFILAGVNRITIMSSRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEYLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPEGV*

Click here to download the sequence:
Link to NCBI Protein BLAST