Transcript Information: S_Transcript_59716.p1


Annotated TAIR IDAT2G03870.2
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1180306-1181256 | Forward length=99
E-Value1.7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58276645040541
Replicate 20.96625355726342
Replicate 30.67309255779564
Condition 2: 8 Hour
Replicate 10.46697935001021
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.47835511293272
Replicate 20.16542928157918
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59716.p1 GENE.S_Transcript_59716~~S_Transcript_59716.p1 ORF type:5prime_partial len:137 (+),score=12.80,LSM|PF01423.18|1.6e-13 S_Transcript_59716:3-413(+)
AACTTCCAACAGCTGAATTTTTTTTGTACATATATGATAAAGTATAAACAAAACAAAACACAGAGTGAATTTCTGTGTTCGGTCTCTCAGTTCGTGTCCAAGCACAGTACTTCTCCACCGAGTTCACTACAGAGGTCTGACCTCAACAATTACACAGTTATCTTCATACTTGCTGGCGTAAACCGGATAACTATCATGTCTAGCCGCAAAGAAACAGTTCTAGATCTTGCCAAGTTTGTTGACAAGGGGGTCCAAGTCAAACTTACTGGAGGAAGACAAGTTACTGGAACATTGAAGGGATATGATCAGTTGCTGAACCTTGTCCTAGATGAAGCCATTGAATATCTGAGAGGTGGTCTTGTATTGTTGGTCCATCAAAAGCTAAATCATGCTATCCTGATGACCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59716.p1 GENE.S_Transcript_59716~~S_Transcript_59716.p1 ORF type:5prime_partial len:137 (+),score=12.80,LSM|PF01423.18|1.6e-13 S_Transcript_59716:3-413(+)
NFQQLNFFCTYMIKYKQNKTQSEFLCSVSQFVSKHSTSPPSSLQRSDLNNYTVIFILAGVNRITIMSSRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEYLRGGLVLLVHQKLNHAILMTH*

Click here to download the sequence:
Link to NCBI Protein BLAST