Transcript Information: S_Transcript_5972.p1


Annotated TAIR IDAT4G17950.1
Annotated Gene NameAT hook motif DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9967295-9969007 | Reverse length=439
E-Value2.3E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9039251172019
Replicate 29.2180148151261
Replicate 37.5792066096989
Condition 2: 8 Hour
Replicate 110.857447581554
Replicate 211.645619839858
Replicate 311.533917539682
Condition 3: 24 Hour
Replicate 16.433767055449
Replicate 28.7964565478974
Replicate 36.8525645758192


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5972.p1 GENE.S_Transcript_5972~~S_Transcript_5972.p1 ORF type:5prime_partial len:438 (+),score=99.61,DUF296|PF03479.11|1.6e+04,DUF296|PF03479.11|4.7e-28 S_Transcript_5972:1-1314(+)
CAGGGGAGAACACCACCCCATCACCAGCAACAATCCCATCACCACCATCACCACCACCACCACCAACAACAACAACACCAACACCAACATCACCACCACCACCAACAACAGCAACATCACCACCACCAACCATCACCTTCAAGTATGAATATGATGATTCACCACCCTACTTACCCAACACCAGCATCTCATAACATACCCAACTCATCAACCCCTCAAATGATCACCCCAAATTCCTCAGCTCAAACTACTTCCATGCTCCAGAATAATAACAACAGCAACAGGTTCCCATTTGGTTCATCAGTTGTTACAAATACCCCACCACCTTCGGCGCCTCCACCTGCAAAACAACCACCTCTTGAAGCCCTTAATTCTCCTTACTCTGGTGGAGATGGGTCTTCTGGGATTAGGGCGTCTGGATTTGGCATTGACCCTAACTCTTCACAAAAGAAGAAAAGGGGTAGACCTAGAAAGTACTCTCCTGATGGTGGGGGTAGTAACATTGCTTTAGGTTTGGCTCCTACCCCTATGTCCACTTCAGTTGCTGTTAGTGGTGGTGGTGGAGGTAGTGTCGGGGGCGGTGGAGGCGGCCAAGGGGACTCCGGTGGGACCCCTGCATCCCCGGACAATGCCTCCAAACGAAATCGTGGACGGCCCCCTGGTTCTAGCAAGAAGCAATTGGATGCATTAGGTAACTGTGGGGTTGGTTTTACGCCACACGTTATCTTGGTGAACGCCGGGGAGGACATTTCAGAAAAGATCTTGGCTTTTTCTAAGGAGGGACCACGGACGGTTTGCGTTCTTTCTGCAAATGGTTCCATCTGCAATGTGAGCCTTCGCCAACCTGCTATGTCTGGCGGTGTTGTGAATTATGAGGGACGATTTGAGATTATTTCTTTATCAGGCTCATTCCTGTTCTCAGAAAATAATGGCGGCCAAGTCAGAACAGGTGGCTTGAGTGTGTCATTATCAGGGTCAGATGGTCGAGTTTTAGGCGGTGGTGTTGCTGGAATGCTGATGGCAGCAACTCCTGTTCAGATTATCGTGGGCAGCTTCATCGCGGATGGAAAAAAGTCGAAATATATGCCTTCAGTACCTCAGTCTCATATGTTGAGCTTTGCTGCACCACCACTACCAGCCGCTGATAGTCCTCCCTCCCAGGAGATCTCAAGTGAAGGGTCTGAAGAGAATGGTAGTAACCATATTGACCGGAACATGGGTTCTTACAACAATTCTAACCATCCCATTCATAACATGCAAATGTATACACCCATGAGCTGGCCTAACTCTGGTTCAAAGATGCTTCCAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5972.p1 GENE.S_Transcript_5972~~S_Transcript_5972.p1 ORF type:5prime_partial len:438 (+),score=99.61,DUF296|PF03479.11|1.6e+04,DUF296|PF03479.11|4.7e-28 S_Transcript_5972:1-1314(+)
QGRTPPHHQQQSHHHHHHHHHQQQQHQHQHHHHHQQQQHHHHQPSPSSMNMMIHHPTYPTPASHNIPNSSTPQMITPNSSAQTTSMLQNNNNSNRFPFGSSVVTNTPPPSAPPPAKQPPLEALNSPYSGGDGSSGIRASGFGIDPNSSQKKKRGRPRKYSPDGGGSNIALGLAPTPMSTSVAVSGGGGGSVGGGGGGQGDSGGTPASPDNASKRNRGRPPGSSKKQLDALGNCGVGFTPHVILVNAGEDISEKILAFSKEGPRTVCVLSANGSICNVSLRQPAMSGGVVNYEGRFEIISLSGSFLFSENNGGQVRTGGLSVSLSGSDGRVLGGGVAGMLMAATPVQIIVGSFIADGKKSKYMPSVPQSHMLSFAAPPLPAADSPPSQEISSEGSEENGSNHIDRNMGSYNNSNHPIHNMQMYTPMSWPNSGSKMLPN*

Click here to download the sequence:
Link to NCBI Protein BLAST