Transcript Information: S_Transcript_59808.p1


Annotated TAIR IDAT5G07950.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2540530-2542047 | Reverse length=303
E-Value8E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2713118128908
Replicate 25.5458378122715
Replicate 37.9616183093139
Condition 2: 8 Hour
Replicate 17.5745921891456
Replicate 28.4352871920281
Replicate 38.2700829505665
Condition 3: 24 Hour
Replicate 16.6847730900179
Replicate 29.5361392971516
Replicate 35.5130151705172


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59808.p1 GENE.S_Transcript_59808~~S_Transcript_59808.p1 ORF type:5prime_partial len:183 (+),score=51.80 S_Transcript_59808:2-550(+)
GTGGCTGTTGTTGTTGACATGTTGAATTCGAGCAGATCTATGAGGTGTTTCTTGAAAGCAACTAGCGGGAGCCCCCTTGTACAATTTTCTAGCAGCTCAGATGATAGTAATGACACTGGTGATGGCGGAGGGATTCCAGTCTTCACATTCTTGTCTGTCTCTGCATTTGAGATGTTGGCTGAGGAGCTTGTGGAAATGTTCAAAAAGGAGCTTGCTTTGAAGCGTTTGCTTGTAGTTGAGCTTCTCTCGGTCAGTTGTCAAAAACTTGAACAACATAATACCCTGTCTTGGGCAGACGAGCTTTATAGTGGAGAAAGTGATCAGTTGAAGATATGCAGCTTGTATTCCAAAGAGGGTCCTGAACCAGTTCTACCAAGAATAAATGGGTTGAGGCCTGAAACTTCTGCTGTGGAATCTGAAAAACAGCCTAGCCATGAAGTTCTGAAGGTCTATCTAACAACATGGCTTGTAGAAGTGAATGTAGACTCAAACAGGGTGGAAGAAATATTTGCCAATGCTGGTGAGGAAATGCGTGTTAGCTTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59808.p1 GENE.S_Transcript_59808~~S_Transcript_59808.p1 ORF type:5prime_partial len:183 (+),score=51.80 S_Transcript_59808:2-550(+)
VAVVVDMLNSSRSMRCFLKATSGSPLVQFSSSSDDSNDTGDGGGIPVFTFLSVSAFEMLAEELVEMFKKELALKRLLVVELLSVSCQKLEQHNTLSWADELYSGESDQLKICSLYSKEGPEPVLPRINGLRPETSAVESEKQPSHEVLKVYLTTWLVEVNVDSNRVEEIFANAGEEMRVSFS*

Click here to download the sequence:
Link to NCBI Protein BLAST