Transcript Information: S_Transcript_59826.p1


Annotated TAIR IDAT5G57930.2
Annotated Gene NameArabidopsis thaliana protein of unknown function (DUF794)
Annotated Gene Symbol(s)APO2
Annotation TypeOrtholog
Chromosome Positionchr5:23454690-23456354 | Forward length=443
E-Value4.8E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.60555502132
Replicate 227.816232524022
Replicate 332.235040870259
Condition 2: 8 Hour
Replicate 130.149689758705
Replicate 232.545253947878
Replicate 328.436443248887
Condition 3: 24 Hour
Replicate 122.927711767068
Replicate 228.964741949944
Replicate 323.971813755725


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59826.p1 GENE.S_Transcript_59826~~S_Transcript_59826.p1 ORF type:complete len:464 (+),score=91.12,APO_RNA-bind|PF05634.7|1.5e-92,APO_RNA-bind|PF05634.7|5e-29 S_Transcript_59826:389-1780(+)
ATGCCATCGTTGATTCTCCAGCCAACGCAGGTGACTCCATCCATACGAGGAGCTTCATCTCATCTACAAGCATGTAGTATGCGTGCAGGCTATTGTAACAAACACTTATTACCTTGTCAACATGCTTCAAGTTTTTCCTATGTTAGAAAATCAGAGTTTGTGAAGCTCCATTTGCTCTCTGATCTTGCATTTCTTCACTCGTTTAAGGTGGATGGTAAAGCATTCAAACTGCCCTTGAAATATAGGATCAAGTCGCAAACCTCAGCACATAATTCTGCTTCAGTAACAAGGAATGACTATCCCCAAAATGCTGACTTACCAAAATACTACTCTAAGAAAGAGAGGAAGCCTTTTCCAGTACCAATTGTAGATCTGAGGCGAGCAGCTAGAGAAAGATTAAAGAATAGTAGAGGCCAGCCTAGGAGACCTGTACCACCGCCGAAGAATGGATTGCTGGTCAAGCGCCTTGTACCAGTTGCTTATGATGTTCTGAATTCAAGGGTTTTATTGATAAACAATCTTAGGAAACTCTTAAGAGTTGTAACTGTTCATGCATGCAAGTGTTGCAATGAAATCCACGTCGGGCCTGTTGGGCACCCATTCAAGTCTTGTAAAGGGCCAGGTGCATCAATTCGGTATGGCCTCCATGATTGGACCAATGCAGTGGTGGAGGACATTTTGGTGCCTGTGGAGGCATACCACCTGTATGATCGACTTGGGAAATGTATATCTCATGAGGAAAGACTTTCGATTCCTCGCATTCCTGCAGTAGATGAACTTTGCATACAAGCTGGAGTTTATATTCCTGAATATCCCACAAAGAGGCGAAGAAAGGCCATCATCCGTATCAGTAAAAATGAGTTTATTGATGCTGATGAAAGTGAGCTGCCAGACCCTGAACCAGAAAGTCCCAGAGTTCCAATATTAACAGAAATACCAGAATCAGAAATTGTACCCCCATCTAGTGCAGAGGAAACAATCTTGCTTGCTGAAGAAACTCTCCAAGCATGGGAAAGGCTGAGGCAAGGAGCAAATAAATTGATGAAAATGTATCCAGTTAGGGTTTGTGGGTATTGTCCTGAAGTGCATGTGGGTCCCTCAGGTCACAAGGCGCAGAACTGTGGAGCCCGCAAGCACCAGCAACGGAATGGACAACATGGATGGCAGAGGGCAGTTCTTGATGATTTAATACCACCTAGATATGTCTGGCATGTTCCTGATGTTAATGGTCCTCCATTGAAGAGGGAGCTTCGAAGCTTTTATGGCCAAGCACCTGCTGTGGTTGAATTGTGTGTGCAAGCTGGGGCAGCAGTTCCAGAACAATATAAGCCCACTATGAGATTGGATATAGGAATTCCGACTAGCATTGAAGAAGCTGAAATGGTGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59826.p1 GENE.S_Transcript_59826~~S_Transcript_59826.p1 ORF type:complete len:464 (+),score=91.12,APO_RNA-bind|PF05634.7|1.5e-92,APO_RNA-bind|PF05634.7|5e-29 S_Transcript_59826:389-1780(+)
MPSLILQPTQVTPSIRGASSHLQACSMRAGYCNKHLLPCQHASSFSYVRKSEFVKLHLLSDLAFLHSFKVDGKAFKLPLKYRIKSQTSAHNSASVTRNDYPQNADLPKYYSKKERKPFPVPIVDLRRAARERLKNSRGQPRRPVPPPKNGLLVKRLVPVAYDVLNSRVLLINNLRKLLRVVTVHACKCCNEIHVGPVGHPFKSCKGPGASIRYGLHDWTNAVVEDILVPVEAYHLYDRLGKCISHEERLSIPRIPAVDELCIQAGVYIPEYPTKRRRKAIIRISKNEFIDADESELPDPEPESPRVPILTEIPESEIVPPSSAEETILLAEETLQAWERLRQGANKLMKMYPVRVCGYCPEVHVGPSGHKAQNCGARKHQQRNGQHGWQRAVLDDLIPPRYVWHVPDVNGPPLKRELRSFYGQAPAVVELCVQAGAAVPEQYKPTMRLDIGIPTSIEEAEMVV*

Click here to download the sequence:
Link to NCBI Protein BLAST