Transcript Information: S_Transcript_59938.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value3.3E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1145.52503728856
Replicate 284.096841621265
Replicate 354.15500620986
Condition 2: 8 Hour
Replicate 114.5967684359
Replicate 210.986683937576
Replicate 313.993609878079
Condition 3: 24 Hour
Replicate 166.424009596082
Replicate 2150.57305858993
Replicate 3106.85675301404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59938.p1 GENE.S_Transcript_59938~~S_Transcript_59938.p1 ORF type:complete len:393 (+),score=55.34,Chal_sti_synt_N|PF00195.15|3.8e-119,Chal_sti_synt_C|PF02797.11|7.2e-71,ACP_syn_III_C|PF08541.6|1.1e+04,ACP_syn_III_C|PF08541.6|2.7e-07,ACP_syn_III|PF08545.6|4.1e-07,FAE1_CUT1_RppA|PF08392.8|1.2e-06 S_Transcript_59938:155-1333(+)
ATGGCCACATCAGTGCAGGAGATCAGAAAGGCGCAGCGGGCCGATGGCCCGGCCACCATTTTGGCCATCGGAACCGCCACGCCACCCAACTGTGTGTACCAAGATGACTACCCTGATTACTACTTTCGTGTCACCAAGAGTGAGCACATGACCGATTTGAAGGCCAAGTTCAAACGCATGTGTGAAAAGTCCATGATCCAAAAGCGTTACATGTACTTGACAGAAGACATCCTAAAGGAGAACCCAAACATGTGTGAGTACATGGGGTCATCCTTAGACACTCGCCAAGACATGGTGGTTGCTGAAGTCCCAAGACTTGGGAAAGAAGCTGCTGTTAAAGCTATTAAAGAGTGGGGCCAACCCAAGTCTAAGATCACTCATCTTATTATGTGTACTACCTCTGGTGTTGACATGCCTGGGGCTGACTATCAGTTAACCAAGCTCCTTGGACTGCGTCCGTCGGTCCGTCGTTTCATGCTCTACCAACAAGGTTGCTTTGCTGGTGGGACGGTCCTCCGTCTGGCCAAGGACCTCGCCGAAAACAACCGTGGGGCCCGTGTTTTGGTTGTTTGCTCCGAGATCACCGCCATTTGCTTCCGTGGGCCCACCGACACCCACCTCGACTCCATGGTGGGCCAGGCCTTGTTTGGTGATGGAGCCGGGGCTATCATTGTTGGAGCTGACCCAGATGAGTCAATTGAGCGGCCCTTGTTCCAGATGGTCTGGACGGCCCAAACTCTTCTTCCGGACTCCGAAGGGGCCATTGATGGACACTTGCGTGAAGTGGGCCTTACATTCCATTTATTGAAGGATGTTCCTGGGCTCATTTCCAAGAACATTGATAAGGCACTTAATGACGCCTTCAGCCCATTAGGTATCTCTGACTGGAACTCCCTCTTCTGGATCGCCCATCCTGGTGGCCCGGCAATTCTGGATCAAGTCGAATCAAAACTGGGGCTTAAAGAAGAGAAGCTCACCGCCACTCGTAACGTGTTGCGTGACTTTGGCAACATGTCTAGTGCTTGTGTCCTCTTCATTCTTGATGAAATGAGGAAAAAGTCTCTCAAAGAAGGCCACGTCACCACCGGCGAGGGCCTTGACTGGGGCGTTCTGTTCGGGTTCGGACCGGGCCTCACCGTCGAGACCGTTGTACTGCACAGTGTGCCAGTAAGCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59938.p1 GENE.S_Transcript_59938~~S_Transcript_59938.p1 ORF type:complete len:393 (+),score=55.34,Chal_sti_synt_N|PF00195.15|3.8e-119,Chal_sti_synt_C|PF02797.11|7.2e-71,ACP_syn_III_C|PF08541.6|1.1e+04,ACP_syn_III_C|PF08541.6|2.7e-07,ACP_syn_III|PF08545.6|4.1e-07,FAE1_CUT1_RppA|PF08392.8|1.2e-06 S_Transcript_59938:155-1333(+)
MATSVQEIRKAQRADGPATILAIGTATPPNCVYQDDYPDYYFRVTKSEHMTDLKAKFKRMCEKSMIQKRYMYLTEDILKENPNMCEYMGSSLDTRQDMVVAEVPRLGKEAAVKAIKEWGQPKSKITHLIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAICFRGPTDTHLDSMVGQALFGDGAGAIIVGADPDESIERPLFQMVWTAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIDKALNDAFSPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLTATRNVLRDFGNMSSACVLFILDEMRKKSLKEGHVTTGEGLDWGVLFGFGPGLTVETVVLHSVPVSN*

Click here to download the sequence:
Link to NCBI Protein BLAST