Transcript Information: S_Transcript_59962.p1


Annotated TAIR IDAT5G03650.1
Annotated Gene Namestarch branching enzyme 2.2
Annotated Gene Symbol(s)SBE2.2
Annotation TypeOrtholog
Chromosome Positionchr5:931924-937470 | Forward length=805
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.836509125426
Replicate 241.832149847097
Replicate 337.920719307029
Condition 2: 8 Hour
Replicate 175.547744491465
Replicate 274.231747253646
Replicate 378.616036696958
Condition 3: 24 Hour
Replicate 144.688909261423
Replicate 247.824883056118
Replicate 353.747599823792


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59962.p1 GENE.S_Transcript_59962~~S_Transcript_59962.p1 ORF type:complete len:481 (+),score=82.67,Alpha-amylase_C|PF02806.14|5e+03,Alpha-amylase_C|PF02806.14|1.6e-25,Alpha-amylase|PF00128.20|7.7e-10,Alpha-amylase|PF00128.20|0.8,Alpha-amylase|PF00128.20|5.4e+03 S_Transcript_59962:4104-5546(+)
ATGGCTATACAGGAACATTCATATTACGCTAGTTTTGGGTATCACGTCACAAATTTTTTTGCACCAAGTAGCCGTTTCGGAACTCCAGAAGATCTTAAATCCTTGATAGATAGAGCTCATGAGCTAGGTTTGCTTGTCCTTATGGATCTAGTACACAGCCATGCCTCTAATAATGTTCTAGATGGGCTGAACATGTTTGACGGAACTGATAGCCACTACTTCCACTCTGGACCAAGAGGTTACCATTGGATGTGGGATTCTCGGCTGTTCAATTATGGAAGTTGGGAAGTGCTCAGGTACCTTCTCTCTAATGCAAGATGGTGGCTAGATGAATATAGATTTGATGGCTTTAGATTTGATGGTGTAACTTCAATGATGTACACTCACCATGGTCTGCAGGTGGCATTCACAGGAAACTACAATGAGTATTTTGGTTTTGCAACTGATGTCGATGCAGTGGTTTACCTAATGTTGGTGAATGATATGATTCATGGGTTGTTCCCTGAGGCTGTAACCATTGGTGAAGATGTTAGTGGAATGCCAACCTTCGGCCTCCCCACGCAAGATGGTGGTGTTGGTTTTGATTACCGTCTCCACATGGCTGTTGCTGATAAATGGATAGAGATTCTCAAGTTAAGAGATGAAGATTGGAAAATGGGTGACATTGTTCACACACTGACCAACAGAAGATGGGCAGAGAAATGTGTAGTGTATGCTGAGAGTCATGACCAAGCTCTTGTTGGTGATAAAACCATTGCATTTTGGTTGATGGACAAGGACATGTATGATTTTATGGCTTTGGATAGACCATCAACTCCACGTATTGATCGTGGAATTGCGTTGCACAAGATGATTAGGCTTATCACAATGGGATTAGGTGGAGAGGGGTATCTGAATTTCATGGGGAATGAATTTGGTCACCCAGAATGGATAGATTTTCCTCGGGCCGATCAATATCTTCCAGACGGAAAATTCATCCCAGGAAACAATAACAGCTATGATAAATGTCGGCGCAGATTTGACTTGGGGGATGCAGATTATCTAAGATATTGTGGCTTGCAAGATTTTGATCAAGCAATGCAGCATGTTGAAGAAAAATATGAGTTCATGACTTCACAGCACCAGTACATCTCACGCAAGGATGAGGGTGACAGGATGATAGTCTTCGAAAGAGGGAACGTGGTGTTTGTATTCAATTTTCATTGGTCAAATAGTTACTTTGATTACCGGGTGGGTTGCTTAAAGCCAGGAAAATATAAGATTGTTCTTGATTCAGATGATCTCTTGTTTGGCGGATTTAATAGAATTGACCACAGTGCTGAATACTTCACCTCTGAAGGATGGTATGACAATCGTCCCCGTTCATTCTCAATATATGCTCCTAGTAGATCAGCAGTCGTCTATGCTCTGGTAGAAGATGAACCCATAGCAATTGAAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59962.p1 GENE.S_Transcript_59962~~S_Transcript_59962.p1 ORF type:complete len:481 (+),score=82.67,Alpha-amylase_C|PF02806.14|5e+03,Alpha-amylase_C|PF02806.14|1.6e-25,Alpha-amylase|PF00128.20|7.7e-10,Alpha-amylase|PF00128.20|0.8,Alpha-amylase|PF00128.20|5.4e+03 S_Transcript_59962:4104-5546(+)
MAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDLVHSHASNNVLDGLNMFDGTDSHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYRFDGFRFDGVTSMMYTHHGLQVAFTGNYNEYFGFATDVDAVVYLMLVNDMIHGLFPEAVTIGEDVSGMPTFGLPTQDGGVGFDYRLHMAVADKWIEILKLRDEDWKMGDIVHTLTNRRWAEKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRADQYLPDGKFIPGNNNSYDKCRRRFDLGDADYLRYCGLQDFDQAMQHVEEKYEFMTSQHQYISRKDEGDRMIVFERGNVVFVFNFHWSNSYFDYRVGCLKPGKYKIVLDSDDLLFGGFNRIDHSAEYFTSEGWYDNRPRSFSIYAPSRSAVVYALVEDEPIAIEE*

Click here to download the sequence:
Link to NCBI Protein BLAST