Transcript Information: S_Transcript_59970.p1


Annotated TAIR IDAT5G03650.1
Annotated Gene Namestarch branching enzyme 2.2
Annotated Gene Symbol(s)SBE2.2
Annotation TypeOrtholog
Chromosome Positionchr5:931924-937470 | Forward length=805
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.311194305433
Replicate 219.008397992429
Replicate 322.830322490586
Condition 2: 8 Hour
Replicate 139.325854186971
Replicate 239.541641076936
Replicate 340.912675241819
Condition 3: 24 Hour
Replicate 126.307816676845
Replicate 227.202666314084
Replicate 332.171666855451


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59970.p1 GENE.S_Transcript_59970~~S_Transcript_59970.p1 ORF type:3prime_partial len:744 (+),score=140.35,Alpha-amylase_C|PF02806.14|1.1e+04,Alpha-amylase_C|PF02806.14|1.2e-19,CBM_48|PF02922.14|1.1e-19,Alpha-amylase|PF00128.20|9.5e-13,Alpha-amylase|PF00128.20|1.5,Alpha-amylase|PF00128.20|4.3e+03 S_Transcript_59970:1927-4155(+)
ATGGAAGATAGATTGGATTCTGATCCAACTGTAAATGAGGCAGTCAGCGATTTACCAGAACAATCTGAGATAAGCCAGAAAGAGAGTGAGGTTGAAAATAATCTTGTACAATCCGAGGTTACGATTGAAAATGAGCGAGACTCTGTGGTTGGTTCCCTGGATGAAGATAAAGAAGTAGAAGCTGTTGAATTGTCTGCTGCTTCAGTTGAGACCAAAAGAACAATTCCTCCACCAGGTGATGGACAAAAAATATATGACATTGATCCACTATTAAGAAGTCACCGTGAACATCTTGATTATCGTTATGGACAATACAAGAAATTGCGTGAATCTATCGACAAATATGAAGGTGGCTTGGAAGCATTTTCACGTGGGTATGAAAAGTTGGGTTTCACCCGCAGTGCCACAGGAATAACATACAGAGAATGGGCACCTGGAGCAAAGTCCGCCTCATTGATTGGAGATTTCAATAATTGGAATCCTAATGCTGATGTTATGACTCGGAATGAATTTGGAGTTTGGGAGATCTTCTTGCCCAATAATGCAGATGGTTCACCAGCTATTCCTCATGGCTCGCGTGTGAAGATTCGCATGGATACTCCATCTGGAATAAAAGACTCCATTCCCGCTTGGATCAAATTTTCAGTGCAGGCGCCAGGTGAAATACCCTACAACGGGATTTATTATGATCCACCAGCTGAGGAAAAGTATGTTTTCAAACATCTTCAGCCAAAGAGACCTGAATCACTAAGGATCTACGAGTCACATGTTGGTATGAGTAGTCCGGAACCTCTCATCAATACATATGCCAACTTCAGAGATGAAGTGCTTCCTCGTATCAAAAAACTTGGTTATAATGCTGTTCAGATAATGGCTATACAGGAACATTCATATTACGCTAGTTTTGGGTATCACGTCACAAATTTTTTTGCACCAAGTAGCCGTTTCGGAACTCCAGAAGATCTTAAATCCTTGATAGATAGAGCTCATGAGCTAGGTTTGCTTGTCCTTATGGATCTAGTACACAGCCATGCCTCTAATAATGTTCTAGATGGGCTGAACATGTTTGACGGAACTGATAGCCACTACTTCCACTCTGGACCAAGAGGTTACCATTGGATGTGGGATTCTCGGCTGTTCAATTATGGAAGTTGGGAAGTGCTCAGGTACCTTCTCTCTAATGCAAGATGGTGGCTAGATGAATATAGATTTGATGGCTTTAGATTTGATGGTGTAACTTCAATGATGTACACTCACCATGGTCTGCAGGTGGCATTCACAGGAAACTACAATGAGTATTTTGGTTTTGCAACTGATGTCGATGCAGTGGTTTACCTAATGTTGGTGAATGATATGATTCATGGGTTGTTCCCTGAGGCTGTAACCATTGGTGAAGATGTTAGTGGAATGCCAACCTTCGGCCTCCCCACGCAAGATGGTGGTGTTGGTTTTGATTACCGTCTCCACATGGCTGTTGCTGATAAATGGATAGAGATTCTCAAGTTAAGAGATGAAGATTGGAAAATGGGTGACATTGTTCACACACTGACCAACAGAAGATGGGCAGAGAAATGTGTAGTGTATGCTGAGAGTCATGACCAAGCTCTTGTTGGTGATAAAACCATTGCATTTTGGTTGATGGACAAGGACATGTATGATTTTATGGCTTTGGATAGACCATCAACTCCACGTATTGATCGTGGAATTGCGTTGCACAAGATGATTAGGCTTATCACAATGGGATTAGGTGGAGAGGGGTATCTGAATTTCATGGGGAATGAATTTGGTCACCCAGAATGGATAGATTTTCCTCGGGCCGATCAATATCTTCCAGACGGAAAATTCATCCCAGGAAACAATAACAGCTATGATAAATGTCGGCGCAGATTTGACTTGGGAGATGCAGATTATCTAAGATATCGTGGCTTGCAAGAGTTTGATCAAGCAATGCAGCATGTTGAAGAAAAATATGAGTTCATGACTTCACAGCACCAGTACATCTCACGCAAGGATGAGGGTGACAGGATGATAGTCTTCGAAAGAGGGAACGTGGTGTTTGTATTCAATTTTCATTGGTCAAATAGTTACTTTGATTACCGGGTGGGTTGCTTAAAGCCAGGAAAATATAAGATTGTTCTTGATTCAGATGATCTCTTGTTTGGCGGATTTAATAGAATTGACCACAGTGCTGAATACTTCACCTCTGAAGGATGGTATGACAATCGTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59970.p1 GENE.S_Transcript_59970~~S_Transcript_59970.p1 ORF type:3prime_partial len:744 (+),score=140.35,Alpha-amylase_C|PF02806.14|1.1e+04,Alpha-amylase_C|PF02806.14|1.2e-19,CBM_48|PF02922.14|1.1e-19,Alpha-amylase|PF00128.20|9.5e-13,Alpha-amylase|PF00128.20|1.5,Alpha-amylase|PF00128.20|4.3e+03 S_Transcript_59970:1927-4155(+)
MEDRLDSDPTVNEAVSDLPEQSEISQKESEVENNLVQSEVTIENERDSVVGSLDEDKEVEAVELSAASVETKRTIPPPGDGQKIYDIDPLLRSHREHLDYRYGQYKKLRESIDKYEGGLEAFSRGYEKLGFTRSATGITYREWAPGAKSASLIGDFNNWNPNADVMTRNEFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPAEEKYVFKHLQPKRPESLRIYESHVGMSSPEPLINTYANFRDEVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDLVHSHASNNVLDGLNMFDGTDSHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYRFDGFRFDGVTSMMYTHHGLQVAFTGNYNEYFGFATDVDAVVYLMLVNDMIHGLFPEAVTIGEDVSGMPTFGLPTQDGGVGFDYRLHMAVADKWIEILKLRDEDWKMGDIVHTLTNRRWAEKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRADQYLPDGKFIPGNNNSYDKCRRRFDLGDADYLRYRGLQEFDQAMQHVEEKYEFMTSQHQYISRKDEGDRMIVFERGNVVFVFNFHWSNSYFDYRVGCLKPGKYKIVLDSDDLLFGGFNRIDHSAEYFTSEGWYDNRP

Click here to download the sequence:
Link to NCBI Protein BLAST