Transcript Information: S_Transcript_59980.p1


Annotated TAIR IDAT1G08600.3
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)ATRX
Annotation TypeOrtholog
Chromosome Positionchr1:2724562-2733431 | Forward length=1479
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3664915011214
Replicate 24.1569703360697
Replicate 33.8800962732475
Condition 2: 8 Hour
Replicate 15.3100505849586
Replicate 24.9897265607912
Replicate 35.2367162225287
Condition 3: 24 Hour
Replicate 15.352141893834
Replicate 24.0438758338623
Replicate 34.5339227625708


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_59980.p1 GENE.S_Transcript_59980~~S_Transcript_59980.p1 ORF type:complete len:1502 (+),score=412.54,SNF2_N|PF00176.19|2e+02,SNF2_N|PF00176.19|6.9e-52,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|8.7e+03,Helicase_C|PF00271.27|7.3e-15,ResIII|PF04851.11|2.3e-07 S_Transcript_59980:331-4836(+)
ATGGAAGAGAAGCCCAATGAGGTGGAAGATAACAATAATGATGATGATAATAATAATAACAATGAGGTAGCCGAAGAAATAGTCCAGGATTCGGAGGATTCTTTTATACATGATTCGAGCGATGATGAGGACGCAGAACTTGCTTCAGAAGAAGGCAGCTCACAACTAGAGGGGCCTCTTACTGAAGAAGAAATAGAAGAATTGATTGCGGAACTACTAGAAGTTGAGAGCAAGGCTGCAGAGGCTCAAGAAACACTGGAAAAAGAGTCCTTGGAGAAGGTTGAGCGAGACGTGAGAGAAGAGTTGGCTGAGACTCTCCAAGGAGATGATCTGGAGAGGGCAGTGGCAGATGAAATGGCAACGTTTAGAGAAGAGTGGGAGGAATCTCTGGATGAGCTGGAGACAGAGAGTGCTCATTTATTGGAGCAACTTGATGGTGCTGGTATTGATCTACCAAGCCTCTACAAATGGATAGAGAGCAGGGCACCAAATGGTTGTTGCACTGAAGCATGGAAGAAGAGGACTCACTGGGTAGGATCTGAGATCACCAATGATGCTGTGGATTCAATCAGAGATGCTGAGAAGCATCTTCAGATGGAAAGGCCTATAAGGAGACGACATGGTAAAATCTTAGAGGAGGGTGCTAGCGGATATCTTGGGAAAAAAGTCGCCGTTGATGATAGCGTTGAGGGTCTAAGTAAGAATGCTGGGGTTGACTGGAGCTCTTTCACCAAATTATTTTCTCAACAGTCATCGCAGGAAGGCATTACCTTTGGTAGCGAGCAATGGGCTTCCGTATACTTGGCCAGTACTCCTCAGCAGGCTGCAGCTATGGGACTTAAATTTCCTGGGGTAGATGAGGTTGAGGAGATTGATGAGATTGATGATGACCTGAGTGATCCATTTGTTGCTGATGCTTTAGCAAATGAGAAAGAGCTGGATCTTTCTGAAGAGCAAAGGAAGAAATATAGAAAGGTCAAAGAGGAAGATGACAAGAATGTTGATCAGAAGCTTCAACTTCATTTGAAGCGAAGGAGACGTAGAGAAAGGAGTAAGCAGGTGGCAAGGGGGAAAGCATTAGAAGTGGACGGGTTCCTGACATGCAGTATGCAAAATTCAGTTGAGGAAAATGATACTGCTGAAGGTGCATCTAGTGGTAATGCATTTAGGGAAGAGAACTATTTTAACGGTGATTCTTCTGAGGTTTTGTTACCTCAGTCAGTTGAACCTAGCCAGGGCTCCAAGCGTTTACGTGATGACGAGGAGGTCAACACTGAAGCTAAGAGACGTCAGTTGGTTATCCCCGATAATGATAATGAAGCACAAATTATGGAAAATGATCATGATTTTATTGGTAATGATGTTGCTGGTGTAGAGAATAAAGTTACTGCTCAAGAAAATGGTAATAGATCCAGTGACATTGATACTGCACAAGAAAATGGTGACAAGTCCAGTGATGTGAGGTTCCAGTGCACTGCTTGTGGTAAAGATATGAATGATGTGCAGCAACATCCACTTCTAAAAGTAATTGTTTGCACGGATTGCAGAAGTGCTGTCGAGGCAAAGATGAGGACAAAGGATGCTAATTTCACTGAGTGTTACTGTGGATGGTGTGGAGGCAATAATGACCTGATAAGTTGTAAATCATGTACAACTTTATTTTGTATGTTATGTATAAAGAGGAACATTGGAGTAGAATGCTTATCAGAAGCAAAATCGGATGGCTGGAAATGTTGTTGTTGTTCCCCAAATCTTCTACAGCATTTGACCTTGAAACTAGACGAAGCCTTGGGCTCCCAAGATTCAACAAGTTCAAGTTCTAGTTCTGACAGTGATACAGGAAATTCAGACGATGATATTAGCGTTCCAATCAGCTCGAAGAAGAAGAAGAAAATTCGAAGAATTCTTGATGATACTGAGCTTGGAGAAGAGACAAAGAAGAAGATTGCCTTGGAAAAGGAGCGTCAGGAACGGCTCAAGTCTCTGAAAGCCCAGTTTTCAGGCATATCTATGATGATGAATGCATCTAAGTATCATGGCAGTTTACCTGAAGGCGCTAATATTGAAGTCCTTGGTGACGCATCAACTGGTTATATTGTGAATGTTGCTAGGGAGGAAGGGGAAGATGCTGTAAGGATTCCTCCAAGCATCTCTGCCAAATTGAAAAAGCACCAGGTTGCAGGAATTCGGTTTATGTGGGAAAACATCATCCAGTCTATCCGAAATGTGAAGGCTGGGGATAAAGGCCTTGGCTGTATTTTAGCTCATATGATGGGCCTTGGCAAAACATTCCAGGTCATAGCTTTCTTATACACTGCAATGAGAACTGTTGACTTAGGTCTGAAATCAGCGTTGATTGTTGCACCAGTGAATGTGCTGCACAATTGGCGGCAGGAGTTTAGAAAGTGGGAACCCAAGGAATGCAAGCCTCTTCGTGTTTATATGTTGGAAGATAAACCAAGGGAGCAGAGGGCAGAGTTGCTAATGAAGTGGAGAACAAAGGGTGGTGTATTCTTGATTGGTTATACTGCATTTAGAAATTTATCCCTTGGAAAAAATGTGAAGGACCGACAGACAGCAAAAGACATTTGCTATGCGCTTCAGGAAGGACCAGACATTCTTGTATGTGATGAGGCCCATATGATCAAGAACACTAGGGCGGATACTACCCAAGCTTTAAAGCAAGTAAAATGCCAGAGAAGGATTGCATTGACAGGGTCGCCTCTTCAGAACAACCTGATGGAGTACTACTGTATGGTTGATTTTGTAAGGGAAGGATTACTTGGAAGCATGAATGAATTTCGCAACCGTTTCCAGAATCCTATAGAGAATGGACAACATGCAAATTCCACGGCGGATGATGTGAGAATTATGAATCAGAGGTCGCATATTCTGTATGAACAACTAAAAGGGTTTGTCCAGAGAATGGACATGAGTGTGGTGAAGAATGACTTGCCTCCTAAAACCGTGTTTGTTATAGCTGTGAAGCTTTCTTCGCTTCAAAGGAAATTATACAGAAAGTTTCTTGATGTTCATGGATTCACTAGTGACAGATCTTGTTATGAAGGAATTAAGAAGAAATCCTTTTTTGCTGGGTATCAGGCCTTAGCCCAGATATGCAACCATCCTTGGATTTTGCAATTGATGAAAGATAGACTGTATAGAAAACGTGAAGTTACTGTTGAGAGTGTTGTTCCAGATGCTAGCTCCAGTGATGAAAATATGGATTCGAATGTGGTGATTGGAGAGAAGGGAAAGACAGGGAATGACTTCACTGTTGGGAAGAATACTGGCTTCCTTCTTGAGGGCTGGTGGAACGGTCTTCTTAGTCCAGATAAGCACCGGGAAATTGACTTCAGTGGCAAAATGGTTTTGTTGCTTGACATTGTAACGATGTGCACTGAAATGGGAGATAAAGCATTGGTTTTCAGCCAGAGCATACCGACTTTGGATCTGATAGAATCATATCTGTCAAAATTGGTTCGGCACGGTAAGAAGGAAAAACTCTGGAAACGCGGAAAAGATTGGTACAGAATTGATGGGAAGACAGAAGGCTCTGAAAGGCAGAGGCTTGTTGATGCATTTAATGACCCTCAGAATAGGAGAGTGAAATGCACTCTTATATCAACCAGAGCCGGAGCATTGGGTATTAATCTTTTTGCAGCCAATCGTGTGATCATCGTTGATGGGTCCTGGAACCCGACATATGATCTTCAGGCTATATACCGGGCTTGGAGGTATGGTCAAACAAAGCCTGTCTATGCTTACCGATTAATGGCACATGGGACTATGGAAGAAAAAATATACAAGCGTCAGGTGCAAAAGGAGGGTCTTGCAGCAAGGGTTGTTGATAGACAACAAGTTCACAGGAGTATGTCTAAAGAAGAGATACTACATCTCTTTGAATTTGGTGATGATGAGAACCTTGATATTTTGCCTGAGATGGAAGAGAAAAATGGGGATGCCGATACAACTATGAGCAGCAAAGTTGACAATATGCTGAAGCAGAATTCTTCTGTTTGTCCTGAAAGCTGCTCTTCTGATAAGTTGATGGAAATTATGCTCAGTCGACATCGTCTGAGATGGATTATGAATTACCATGAGCATGAGACACTTTTGCAAGAGAACAAAGAGGAGAAGCTCACAAAAGAAGAACAAGATATGGCATGGGAAGTATTCAGGAGAAGTGTGGACTGGAAGGAAGTGCATAAGGTACCTGCTGATGACTCGGGAATAGAGTGGCTGGAAGTTCGTAGGGTTCCTGCTGATTTATCAGAATTCGACCACAAGGGAAACAATTCAAATAGGTCATCCATTGCACAAGAGAGAAACAGTATGCCTGGACCTGTGCTCAATATCAGGACTCGTGTTCCATCAAGGAAATGCACCAATGTGTCTCACTTGCTAACTTTGAGGAGCCAGGGAATAAAAGTTGGTTGCAGTACTGTTTGTGGGGAATGCGCCATAGAGATCAGTTGGGAGGACCTTAATAGGGACAAGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_59980.p1 GENE.S_Transcript_59980~~S_Transcript_59980.p1 ORF type:complete len:1502 (+),score=412.54,SNF2_N|PF00176.19|2e+02,SNF2_N|PF00176.19|6.9e-52,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|1.1e+02,Helicase_C|PF00271.27|8.7e+03,Helicase_C|PF00271.27|7.3e-15,ResIII|PF04851.11|2.3e-07 S_Transcript_59980:331-4836(+)
MEEKPNEVEDNNNDDDNNNNNEVAEEIVQDSEDSFIHDSSDDEDAELASEEGSSQLEGPLTEEEIEELIAELLEVESKAAEAQETLEKESLEKVERDVREELAETLQGDDLERAVADEMATFREEWEESLDELETESAHLLEQLDGAGIDLPSLYKWIESRAPNGCCTEAWKKRTHWVGSEITNDAVDSIRDAEKHLQMERPIRRRHGKILEEGASGYLGKKVAVDDSVEGLSKNAGVDWSSFTKLFSQQSSQEGITFGSEQWASVYLASTPQQAAAMGLKFPGVDEVEEIDEIDDDLSDPFVADALANEKELDLSEEQRKKYRKVKEEDDKNVDQKLQLHLKRRRRRERSKQVARGKALEVDGFLTCSMQNSVEENDTAEGASSGNAFREENYFNGDSSEVLLPQSVEPSQGSKRLRDDEEVNTEAKRRQLVIPDNDNEAQIMENDHDFIGNDVAGVENKVTAQENGNRSSDIDTAQENGDKSSDVRFQCTACGKDMNDVQQHPLLKVIVCTDCRSAVEAKMRTKDANFTECYCGWCGGNNDLISCKSCTTLFCMLCIKRNIGVECLSEAKSDGWKCCCCSPNLLQHLTLKLDEALGSQDSTSSSSSSDSDTGNSDDDISVPISSKKKKKIRRILDDTELGEETKKKIALEKERQERLKSLKAQFSGISMMMNASKYHGSLPEGANIEVLGDASTGYIVNVAREEGEDAVRIPPSISAKLKKHQVAGIRFMWENIIQSIRNVKAGDKGLGCILAHMMGLGKTFQVIAFLYTAMRTVDLGLKSALIVAPVNVLHNWRQEFRKWEPKECKPLRVYMLEDKPREQRAELLMKWRTKGGVFLIGYTAFRNLSLGKNVKDRQTAKDICYALQEGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGLLGSMNEFRNRFQNPIENGQHANSTADDVRIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVIAVKLSSLQRKLYRKFLDVHGFTSDRSCYEGIKKKSFFAGYQALAQICNHPWILQLMKDRLYRKREVTVESVVPDASSSDENMDSNVVIGEKGKTGNDFTVGKNTGFLLEGWWNGLLSPDKHREIDFSGKMVLLLDIVTMCTEMGDKALVFSQSIPTLDLIESYLSKLVRHGKKEKLWKRGKDWYRIDGKTEGSERQRLVDAFNDPQNRRVKCTLISTRAGALGINLFAANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVYAYRLMAHGTMEEKIYKRQVQKEGLAARVVDRQQVHRSMSKEEILHLFEFGDDENLDILPEMEEKNGDADTTMSSKVDNMLKQNSSVCPESCSSDKLMEIMLSRHRLRWIMNYHEHETLLQENKEEKLTKEEQDMAWEVFRRSVDWKEVHKVPADDSGIEWLEVRRVPADLSEFDHKGNNSNRSSIAQERNSMPGPVLNIRTRVPSRKCTNVSHLLTLRSQGIKVGCSTVCGECAIEISWEDLNRDKK*

Click here to download the sequence:
Link to NCBI Protein BLAST