Transcript Information: S_Transcript_60007.p1


Annotated TAIR IDAT3G05680.2
Annotated Gene Nameembryo defective 2016
Annotated Gene Symbol(s)EMB2016
Annotation TypeHomolog
Chromosome Positionchr3:1660802-1672015 | Reverse length=2152
E-Value3E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.743817610125
Replicate 27.881450510988
Replicate 37.9103252736112
Condition 2: 8 Hour
Replicate 110.063953614418
Replicate 29.9430438398785
Replicate 310.033983221461
Condition 3: 24 Hour
Replicate 17.1772317322741
Replicate 26.9047454623281
Replicate 36.2075760423583


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60007.p1 GENE.S_Transcript_60007~~S_Transcript_60007.p1 ORF type:5prime_partial len:837 (+),score=220.96 S_Transcript_60007:1-2511(+)
TATCCTCTGCTTTATTGTTGGATTAGTCTGTATAGATCAATTGAGAAGGAGGGTCTATCCACCCACGCAATTGAAGCCGTTGGCATGCTCTCTATTGGTGCTTTGAGATTTTGCATGGATAGAAACAGATTCAACATGGACAAAATCGAGGCCTTGAGGTATTTCTTCGGGTTGCTGAGTGATGTGGATGGAATGAATGGTGTTTCTGAAGAAAACCTGAAGTATATCCAAGATATGTCTACATTGTTTAGATCAAAGATCATTGGTGATCAGTCTGTGGATACTTCACATCTGAAAGATATGTTGCATCAGGTTTCAGAATGTGCTCAATCTCTTTCATCGTTGCTGCTGAAGCCAGTTGATTTACTCAAGTTTGATGATATCATCTCTGAAGAAGTCCTCTTGCATTCATCTGATACACCACTTTCTTCAAAGATACATCTAATGACAGATAATAGTTCAGATAGGGTTGACAATGAGTGGAACGTTGGAGAGTTAGGTGACAAATTTCAATGGGAATGCCCTGAAAACTTGCGTAATAGACTCTCACAGGCAAGCCTGCTTGAAAAGAGAAAAATGTCGGCAGTAGATGGAGCTAATAGACAAGGCAAAGGGGAAAATGCTCCAGCTGATGCACGAGGATCGGGACCAGCTATTATACCTCCTGCTCCTACTCGAAGGGACACTTTCCGGCAACGAAAGCCAAATACAAGCAGGCCTCCTTCTATGCATGTGGATGACTATGTTGCTAGGGAAAGAAATGCTGATGGGTCTGGCAATCCCAATGTTATTGCTATTCCACGAGTAGGCTCTACTGGTGGGCGGCCTCCATCAATTCATGTCGATGAGTTCATGGCCAGACAGAGGGAGCGTCAAAATGCTGTTGCTATGGCGGGAGTGGAGGCAGCATCTCAAGGAAAGAAGGTTGCACCTGATAATGGAAATGATATGGAAGTTTCCAACAGATCTAAGCAGCTCAAGGTTGATCTTGATGATGACCTTCAAGGCATTGATATAGTGTTTGATGCTGAGGAGAATGAACCTGATGATGAGCTGCCTTTCCCTCTAGCTGATGATCACCTACAGCATTCTGCATCTGCTACAGCTGAGCGAAGTCCTCAGCATTCAATTGTTGAAGAAACAGAGAGTGATGCCAAGGACATGGAGCAAACTGTGGCTTCTAATGCTGATGAGAATACTCAAAGTGAGCTTTCTTCCAGGATGTCAGTATCACGTCCTGAAATGAAACTACGACGTGAACCCAGTGTTTCTTCAGAGAAGTATCTTGGGCAGCCTGATGATATTAAACATTCAAGTGCAGCTACTATGACTGGTGGGTTAGATTCCAATTTAGGTGCAAAGACTTCTGTATCCTCTCCTTCACCATATCGCAAAGGCTCCCCTTCACTGGTTCAGTTACCTGCTGATTCAAGGATGCCACCTCCCAGTTTTGTTAGGGATAATGGTTTGCAAAGAGTTGGAAATGTACCTGTTGGTGGACCACCAGGCCACCTCAAGCCAAAACTTTTGCCGAGTCAGCCACCGTTACCTCCCACACCACTCCCACCAACAATTTCACCTGTGAGATCCCAGACTGCTGAAGCTAACCCAGTCCCATCATCTCCTTTTGTCAATCCTCACAATGACGTGTTGCCACCATCACATCCAATGTACCATGTTCAAACAGATTATCAGTCTTCGTATGGCAGCATCCCTACTTCATTAGTATCCTCCAATTTCATGATGGATTCTCGGTATTCACGGACATCTCACTCATCACCTAGTGGGTCTGTTAGACCTTTGCCACCTCTTCCTCCTACACCACCTCCATTCTCAGCTTCTACATTGAGTGTGCCATCCAGGTCTCCTTCCCAATCCTCGGTTTATGGTCACAACAATGCTGGAGTTGCTGAGGCTTCACAATATGCGCCTCCACCAATGGCACCTCCAGGTTTTAGTAGGCCACCTTCAATGCCATTTACGCTTCATGGAAATATTCCAGTTCAACAGAGTGATAATCTTGCTAGCATGGCTCAGAATGTTCATGCGCCACAACCATCAATGCAATCTATACAGCAACTCACACACTTACAGCCCTTGCAACCTCCGCAGTTGCCTTGCTCTCCTCAGTTACCTCAACAGATTAGAGCTCCGATACAAAGTTTGATGCAGGCTGAGCAAGGTGGTTCCATGTCACAGAGTCATGTTCAGATGCAGATGCAACCTCAACAACAAATACTGCAACAATCTCAAATCTCTCAATATCATTTGTATTATCAGGCTCAACAGCAAGAGAACTCGTCAAATCTGCAGCAGCAGCCGCAAGCACCCAATCACCAAGCAGATACCTCTACTCAACAACTGATGGATTCCGCGATGTCACTACAACAGTATTTTAGTTCTCCTGAAGCGATTCAGTCTTTGTTGAGCGACCGTGATAAGCTCTGTCAGCTTCTTGAGCAACACCCCAAGTTGATGCAGATGCTTCAGGAACGGCTGGGGCAACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60007.p1 GENE.S_Transcript_60007~~S_Transcript_60007.p1 ORF type:5prime_partial len:837 (+),score=220.96 S_Transcript_60007:1-2511(+)
YPLLYCWISLYRSIEKEGLSTHAIEAVGMLSIGALRFCMDRNRFNMDKIEALRYFFGLLSDVDGMNGVSEENLKYIQDMSTLFRSKIIGDQSVDTSHLKDMLHQVSECAQSLSSLLLKPVDLLKFDDIISEEVLLHSSDTPLSSKIHLMTDNSSDRVDNEWNVGELGDKFQWECPENLRNRLSQASLLEKRKMSAVDGANRQGKGENAPADARGSGPAIIPPAPTRRDTFRQRKPNTSRPPSMHVDDYVARERNADGSGNPNVIAIPRVGSTGGRPPSIHVDEFMARQRERQNAVAMAGVEAASQGKKVAPDNGNDMEVSNRSKQLKVDLDDDLQGIDIVFDAEENEPDDELPFPLADDHLQHSASATAERSPQHSIVEETESDAKDMEQTVASNADENTQSELSSRMSVSRPEMKLRREPSVSSEKYLGQPDDIKHSSAATMTGGLDSNLGAKTSVSSPSPYRKGSPSLVQLPADSRMPPPSFVRDNGLQRVGNVPVGGPPGHLKPKLLPSQPPLPPTPLPPTISPVRSQTAEANPVPSSPFVNPHNDVLPPSHPMYHVQTDYQSSYGSIPTSLVSSNFMMDSRYSRTSHSSPSGSVRPLPPLPPTPPPFSASTLSVPSRSPSQSSVYGHNNAGVAEASQYAPPPMAPPGFSRPPSMPFTLHGNIPVQQSDNLASMAQNVHAPQPSMQSIQQLTHLQPLQPPQLPCSPQLPQQIRAPIQSLMQAEQGGSMSQSHVQMQMQPQQQILQQSQISQYHLYYQAQQQENSSNLQQQPQAPNHQADTSTQQLMDSAMSLQQYFSSPEAIQSLLSDRDKLCQLLEQHPKLMQMLQERLGQL*

Click here to download the sequence:
Link to NCBI Protein BLAST