Transcript Information: S_Transcript_60053.p1


Annotated TAIR IDAT1G22700.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8028323-8029878 | Reverse length=301
E-Value3.2E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.80699640835
Replicate 286.856855544268
Replicate 388.991343630162
Condition 2: 8 Hour
Replicate 170.714677185437
Replicate 271.440215544703
Replicate 369.256694448899
Condition 3: 24 Hour
Replicate 181.37016080883
Replicate 289.222960815435
Replicate 382.792063976645


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60053.p1 GENE.S_Transcript_60053~~S_Transcript_60053.p1 ORF type:complete len:269 (+),score=73.22,TPR_2|PF07719.13|2,TPR_2|PF07719.13|0.00038,TPR_2|PF07719.13|2.1e-08,TPR_12|PF13424.2|4.4e-06,TPR_12|PF13424.2|7.3e-10,TPR_11|PF13414.2|3.6,TPR_11|PF13414.2|7.6e-13,TPR_1|PF00515.24|2.8e+03,TPR_1|PF00515.24|0.0011,TPR_1|PF00515.24|3.2e-09,TPR_8|PF13181.2|67,TPR_8|PF13181.2|0.029,TPR_8|PF13181.2|2.1e-07,TPR_16|PF13432.2|12,TPR_16|PF13432.2|1.1e-08,TPR_17|PF13431.2|6.1,TPR_17|PF13431.2|0.00013,TPR_17|PF13431.2|79,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|0.29,TPR_14|PF13428.2|0.024 S_Transcript_60053:3197-4003(+)
ATGAGAGGAATGCACCTCATACCATTGGGAAGGGATGAACTCCGCTGCTTTTTGTCAAATTGGTATGCTCACTCATTTTCTGCAGAATTCTGCAGGAAACCTTATGCTGTGAAGGATAAGGAAAATTTCAGAAGGTCACTAAGCGGTGTTACTGCCTTCTCATCTGCTACAGTCTCTTGGTTAGCTTCTTCACAGGTGGCGTACTCTGCCACGGACATCAAAATAGATCCGGTTTATGAGGTTGGTGAGTTGTTTGAATTAGGAATTCAGTTGTCATATTTGCTTTTGCTACTGGCTTTGCTTGGAGTTGGAACCTTTTTTGTTATCCGCCAAGTGCTAGTTCGGCGAGAACTTGACCTTTCTGCCAAAGAACTGCAGGAGCAAGTTAGGAGTGGTGATGCTAATGCTACTGAACTATTTGAACTTGGAGCAGTGATGCTGAGAAGAAAGTTCTATCCAGCTGCGACTAAATACTTGCTTCAGGCAATTGAGAAATGGGATGGAGATGATCAGGATCTTGCCCAGGTTTACAATGCCTTGGGAGTCAGCTACATACTTGAAGGAAAACTTGAAAAGGGCATCTCCCAGTTTGAGAATGCTGTTAAGCTTCAGCCAGGATATGTCACAGCTTGGAACAACCTTGGTGATGCATATGAAAAGAAGAAAGATCTCAAATCTGCCCTCAAGGCATTTGAAGAAGCGCTGCTGTTTGATCCCAACAACAAGGTGGCACGGCCTCGAGTTGACTCATTGAGGGACCGTGTTAATATGTACAAAGGTGTTCCAGTGAAATCAAAGGAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60053.p1 GENE.S_Transcript_60053~~S_Transcript_60053.p1 ORF type:complete len:269 (+),score=73.22,TPR_2|PF07719.13|2,TPR_2|PF07719.13|0.00038,TPR_2|PF07719.13|2.1e-08,TPR_12|PF13424.2|4.4e-06,TPR_12|PF13424.2|7.3e-10,TPR_11|PF13414.2|3.6,TPR_11|PF13414.2|7.6e-13,TPR_1|PF00515.24|2.8e+03,TPR_1|PF00515.24|0.0011,TPR_1|PF00515.24|3.2e-09,TPR_8|PF13181.2|67,TPR_8|PF13181.2|0.029,TPR_8|PF13181.2|2.1e-07,TPR_16|PF13432.2|12,TPR_16|PF13432.2|1.1e-08,TPR_17|PF13431.2|6.1,TPR_17|PF13431.2|0.00013,TPR_17|PF13431.2|79,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|0.29,TPR_14|PF13428.2|0.024 S_Transcript_60053:3197-4003(+)
MRGMHLIPLGRDELRCFLSNWYAHSFSAEFCRKPYAVKDKENFRRSLSGVTAFSSATVSWLASSQVAYSATDIKIDPVYEVGELFELGIQLSYLLLLLALLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYILEGKLEKGISQFENAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEALLFDPNNKVARPRVDSLRDRVNMYKGVPVKSKER*

Click here to download the sequence:
Link to NCBI Protein BLAST