Transcript Information: S_Transcript_60055.p1


Annotated TAIR IDAT1G22700.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8028323-8029878 | Reverse length=301
E-Value2.9E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2810549468031
Replicate 21.057804978785
Replicate 32.2737619829097
Condition 2: 8 Hour
Replicate 13.3594792965347
Replicate 23.0646367999626
Replicate 31.3139906057865
Condition 3: 24 Hour
Replicate 12.3939598345857
Replicate 22.4837053782299
Replicate 31.7275372880216


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60055.p1 GENE.S_Transcript_60055~~S_Transcript_60055.p1 ORF type:complete len:146 (+),score=25.11 S_Transcript_60055:3217-3654(+)
ATGAGAGGAATGCACCTCATACCATTGGGAAGGGATGAACTCCGCTGCTTTTTGTCAAATTGGTATGCTCACTCATTTTCTGCAGAATTCTGCAGGAAACCTTATGCTGTGAAGGATAAGGAAAATTTCAGAAGGTCACTAAGCGGTGTTACTGCCTTCTCATCTGCTACAGTCTCTTGGTTAGCTTCTTCACAGGTGGCGTACTCTGCCACGGACATCAAAATAGATCCGGTTTATGAGGTTGGTGAGTTGTTTGAATTAGGAATTCAGTTGTCATATTTGCTTTTGCTACTGGCTTTGCTTGGAGTTGGAACCTTTTTTGTTATCCGCCAAGTGCTAGTTCGGCGAGAACTTGACCTTTCTGCCAAAGAACTGCAGGTACTCTTTCTTGTTTCAATGCATGTACTTGTTCGCCCTTTTTGTAGTGTGTTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60055.p1 GENE.S_Transcript_60055~~S_Transcript_60055.p1 ORF type:complete len:146 (+),score=25.11 S_Transcript_60055:3217-3654(+)
MRGMHLIPLGRDELRCFLSNWYAHSFSAEFCRKPYAVKDKENFRRSLSGVTAFSSATVSWLASSQVAYSATDIKIDPVYEVGELFELGIQLSYLLLLLALLGVGTFFVIRQVLVRRELDLSAKELQVLFLVSMHVLVRPFCSVFK*

Click here to download the sequence:
Link to NCBI Protein BLAST