Transcript Information: S_Transcript_60056.p1


Annotated TAIR IDAT1G22700.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8028323-8029878 | Reverse length=301
E-Value1.5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8011003156572
Replicate 26.863978973449
Replicate 38.9139891070736
Condition 2: 8 Hour
Replicate 13.5542317195222
Replicate 24.1015055839499
Replicate 36.1579115303279
Condition 3: 24 Hour
Replicate 18.0097906132179
Replicate 27.0509636015303
Replicate 35.1845313499405


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60056.p1 GENE.S_Transcript_60056~~S_Transcript_60056.p1 ORF type:internal len:180 (+),score=42.79 S_Transcript_60056:2-538(+)
GATAAAATTCTCCATGTGGTGAATTCTCCTTCTCCTGGCAGAGCTTCTTCTTCTTCATCTTCTATGTTTGTGTCTCATTCTTCTGTTCTTGTTGCTTCATTGTCTATTCCCAAGTTCAAACTCTTGTCTTTCTCTTCAAATGATCCCCCTAACTTGAGCTCTTGGGATGGTCTTCTCATGCTTCAACGTTATAAATTTGGAAAGGCATTGATGTTGCAGCCTATTATATCTGTAAATCGTCAAGAATTCTGCAGGAAACCTTATGCTGTGAAGGATAAGGAAAATTTCAGAAGGTCACTAAGCGGTGTTACTGCCTTCTCATCTGCTACAGTCTCTTGGTTAGCTTCTTCACAGGTGGCGTACTCTGCCACGGACATCAAAATAGATCCGGTTTATGAGGTTGGTGAGTTGTTTGAATTAGGAATTCAGTTGTCATATTTGCTTTTGCTACTGGCTTTGCTTGGAGTTGGAACCTTTTTTGTTATCCGCCAAGTGCTAGTTCGGCGAGAACTTGACCTTTCTGCCAAAGAACTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60056.p1 GENE.S_Transcript_60056~~S_Transcript_60056.p1 ORF type:internal len:180 (+),score=42.79 S_Transcript_60056:2-538(+)
DKILHVVNSPSPGRASSSSSSMFVSHSSVLVASLSIPKFKLLSFSSNDPPNLSSWDGLLMLQRYKFGKALMLQPIISVNRQEFCRKPYAVKDKENFRRSLSGVTAFSSATVSWLASSQVAYSATDIKIDPVYEVGELFELGIQLSYLLLLLALLGVGTFFVIRQVLVRRELDLSAKELQ

Click here to download the sequence:
Link to NCBI Protein BLAST