Transcript Information: S_Transcript_60138.p1


Annotated TAIR IDAT2G25320.1
Annotated Gene NameTRAF-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10781951-10788065 | Reverse length=1673
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5647052835043
Replicate 29.4287882408663
Replicate 39.2514050712524
Condition 2: 8 Hour
Replicate 112.031132257093
Replicate 211.761616841863
Replicate 310.900938351733
Condition 3: 24 Hour
Replicate 111.612654676433
Replicate 29.7889948372106
Replicate 39.4151344912909


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60138.p1 GENE.S_Transcript_60138~~S_Transcript_60138.p1 ORF type:complete len:1535 (+),score=390.24,FancD2|PF14631.2|2.9e+02,FancD2|PF14631.2|2.3e-07,FancD2|PF14631.2|7.4e-05,FancD2|PF14631.2|0.00026,MATH|PF00917.22|1.9e+03,MATH|PF00917.22|1.9e-10,MATH|PF00917.22|0.001 S_Transcript_60138:214-4818(+)
ATGCCTGCTTCTCCCTCAGATGCTTGCCCTAAATGGCGGAGAACCCGCGGTCCGAAGACCACCTCGAAACGGCACCGTCCCGAGGACGACGACGACAACAACAACAACGACGACGATGACGAAAACGACGTCGCTCCAGCTGTCGAACCTGACGAAGATGAAGACCTCCACCCTACTACCACTCCTCCAAACCCTAAAACCCCTTTAAACAACAATCGGAGCGAAACCGAGGTCCTTTCCGGTGGGGCGGTTAGGGTTTCGGATTTCCCGGTGGCATTCAAGCGCGCCGTCAACCGGCCCCACTCCTCCGTCCTCGCAATTGTCGCTGCCGAGAAGGGTCAGGGACAGAGTGGTAATTGTAGTGGTAGTGGTGGTGGTGGTGGGAGCACGGGGTCGAGCAATAGCACTTCATTGGTGCAGTCTGATAGGAGTTGTTGGTGCTTGTTTAGGATGTCGGTGTTGAACCAGAAGCCGGGGTTGAATCATATGCAGAGGGACTCGTATGGGAGGTTTGCTGGGGATAATAAGAGTGGGGATAATACGAGTTTGGGGTGGAATGATTATATGAAGATGTCGGATTTTGTTGGGGACAATGCTGGGTTCTTGGTGGATGATACCGCAGTTTTCAGCACCTCGTTTCATGTGATTAAGGAGTTTAGTAGCTTCTCGAAGAATGGGGGGTTGCTTGGGGCTAGGAGTGGAGGCGGTGGCGGCGGGTCTAGGAAGTCGGATGGTCATAGTGGGAAGTTTACTTGGAGGATTGATAATTTTACCAGGTTGAAGGACCTTCTCAAGAAGAGGAAGATCACTGGGCTTTGCATTAAGAGCAGGAGGTTTCAGATTGGCAACCGTGATTGTCGCCTTATCGTTTATCCCCGAGGGCAGTCTCAACCTCCATGCCACCTCTCTGTGTTTCTTGAGGTTACTGATTCACGAAATACTTCAAGTGATTGGAGTTGCTTTGTCAGTCATAGATTATCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTGACAAAAGAATCACAAAATCGATACTCAAAAGCTGCAAAAGACTGGGGCTGGCGTGAATTTGTGACGCTTACTAGCTTGTTTGATCAGGACTCAGGGTTCCTTGTGCAGGATAGTGTTCTTTTCTCAGCAGAGGTTCTTATATTGAAGGAGACATCCATAATGGAGGAATTCTCTGAGAATGAAGCCGAGAGTGATAGCAATGGAAAGAAAAGCTCTTTTACTTGGAAAGTGGAGAACTTTTTGTCCTTCAAGGAAATAATGGAAACTCGGAAAATTTTCAGCAAATTCTTTCAGGCTGGTGGATGTGAGCTACGTATTGGTGTTTATGAGTCCTTTGACACAATATGTATATATCTGGAGAGTGATCAATCATCTGGAACTGATCCTGATAAGAACTTCTGGGTTAGATACAAAATGGCTGTAGTGAATCAGAAGAGCCCTGCTAAAACGGTTTGGAAGGAGTCCTCTATTTGTACAAAGACTTGGAACAATTCTGTGCTCCAGTTTATGAAGGTTTCTGATATGCTAGAACCAGATGCAGGGTTTCTGTTGCGAGATACTGTGGTTTTTGTCTGTGAAATCTTGGACTGTTGTCCTTGGTTTGAGTTCTCTGACTTAGAGGTTCTTGCCTCTGAGGATGATCAGGACGCCCTAACAACTGACCCTGATGAACTGATGGACTCTGAGGACAGTGAAGGAATAAGCGGTGATGAGGAGGACATCTTTAGAAACCTTTTGTCTAGAGCAGGATTCCACCTTACATACGGGGATAATTCTTCACAACCACAAGTGACCTTAAGAGAAAAGCTCTTAATGGATGCTGGTGCTATAGCTGGTTTTTTGACTGGACTGCGTGTTTACCTTGATGATCCTGCTAAAGTAAAGCGGCTACTCCTCCCTACTAAGCTTTCTGGTACTAATGAGGGAAAGAAGGCCTCAAAGTCTGATGAATCATCTCCTAGTTTAATGAATTTGTTGATGGGAGTGAAAGTATTGCAGCAGGCTATTATCGATTTACTCTTAGATATAATGGTTGAGTGTTGCCAACCTTCAGAAGGGATTTCTAATGAGGATGTAGGTGATGCAACTTCGAAGGGCTCCCCAAAAGATAGTGGAGCTACATCACCCTTACAATCCGAGAGGGAAAGCGGAGCAGCAGAACAAATAGAACACCCTTTGTATGAGAGGCTGGATTCAGTAGTCAATGAGAGTGTGAACAGCGCTGCTTCCACAAGCATGAGAACAAGTGCGAGTGCAGGAGCTAGTGATCCTGATGAGCATGAAAAGGCTGTTCCTGGACAGCCTGCCTCTCCACCAGAAACTTCAGCTCGAGAATCATCTGAAACAGCTTCTCTCCGCTCAAAGACCAAGTGGCCTGAGCAATCTGAGGAGCTGTTAGGATTGATTGTAAATTCATTGCGAGCTTTGGATGGAGCTGTTCCTCAAGGTTGTCCTGAGCCAAGAAGGAGGCCCCAATCTGCGCAAAAGATTGCTCTTGTCTTGGATAAAGCTCCTAAGCATTTGCAACCAGATCTTGTTGCACTGGTGCCCAAGTTAGTTGAGCATTCTGAGCATCCTCTGGCAGCTGCTGCCCTTCTTGACAGGCTCCAAAGGCCTGATGCAGAGCCTGCATTAAGGCTACCTGTCTTTGGTGCTTTAAGTCAACTGGAGTGCAGCAGTGAAGTTTGGGAACGCGTTCTATTTCAGTCTTTTGCACTTCTTGCTGATTCAAATGAGGAACCTTTGGCAGCTACAATAAATTTTGTGTTGAAAGCTGCAACTCAATGCCAGCATCTTCCTGAAGCTGTTAGATCTATCCGTGTAAGGCTAAAGCAATTGGGACCTGAGGTGTCTCCTTGTGTCCTTGATTTTCTAAGTAGGACTGTACATAGTTGGGCGGATGTTTCAGAAACCATACTAAGAGATATCGATTCTGATGATGAATGCGGTGTAAATTGTTCGGCAGTTCCAAGTGGGGTCTTCTTTTTCGGTGAAAATGGCCCCCCTTCCAAAATCATACATTCAGTGAATGAGCATTCCTTCTGTGGTAGTCATCATTTTGCTGATATCTTTCTCCTGATGGAGATGTTGTCCATACCTTGTCTTGCCGTTGATGCTACTCAGACCTTTGAGAGAGCAGTATCTCGTGCGGCCATAACAGCTCCATCATTAGCGATGGTCTTGGAGAGACGGCACTCTCAAAGAGCAGCCTATAATACAAGATTTCTTGCTGAAGGATTGCAGCCTGCAGATACAGTATTAGAGGGTGAGGTCAATGATCAACTTAGAGCCCTGCAAGATGACTTTTCTACACTTCTTGGTCTGGCAGAGACATTGGCACTTTCCAGAGATCCTCGGGTAAAGGGCTTTGTAAAGCTGCTTTATACAATATTGTTTAAATGGTATGCTGATGATTCCTATCGTGCGAGAATGCTTAAACGATTGGTTGATCGTGCGACTAGTAGTACAGATAACACTCGAGAAGTAGATTTTGATATGGAAGTTCTGGTGCTTCTTGTTTGTGAGGAACAAGAAGTCATAAGACCAGTTTTGAGCATGATGCGAGAGGTTGCTGAACTTGCAAATGTGGATCGTGCAGCTCTTTGGCATCAACTTTGTGCTAGCGAAGATGAAATCATTAGAATTCGTGAAGAGCGGAAAGCTGAGGTTTCTAATTTGGTCAAAGATAAAACTCTTTTATCACAGAAGCTTAATGATTCTGAGTCTGCAAACTGTCGCCTTAAGTCTGAAATGAAGGCTGAGATGGATCGTTTTGTTCGTGAGAAAAAGGAGCTTTCAGAGCAAAGGCAAGAAGTTGAAAGTCAACTTGACTGGCTTCGTGCTGAGCGAGAAGAGGAGATTGCAAAGCTAACAGCTGATAAAAGGGCTCTGCAGGATCGTCTTCATGATGCAGAGGTGCAACTGGCTCAGTTGAAGTCCAGGAAGCGCGATGAGCTAAAGAGAGTGGTGAAGGAGAAAAATGCTCTTGCTGAGCGTTTGAAAAATGCTGAAGCTGCCAGGAATAGATTTGATGAAGAGTTGAAACGATATGCTACTGAAAAAGTAACGAGGGAGGAAATTAGGCAGTCCTTGGAGGACGAGGTGCGAAGACTAACCCAAACAGTGGGGCAAACAGAAGGGGAGAAGCGAGAGAAGGAGGAGCAGGTTGCTCGATGTGAAGCATACATTGATGGGATGGAGTCAAAGTTGCAGGCTTGTCAGCAATATATTCATACACTTGAGGCTTCACTTCAAGAAGAAATGTCCCGACATGCCCCTCTTTATGGTGCTGGTTTGGAAGCGCTTTCAATGAAGGAGCTTGAGACCTTGGCTCGTATCCATGAAGAAGGCCTACGTCAGATCCATGCACTCCAACAGCAGCGCAAGGGCTCTCCTGCTGGTAGTCCTCTTATGAGCCCGCACACCCTTCCACACACACATGCATTGTTTCCGAACACACTGGCACATGCAGCACCACCTCCACCATCACTGGCTGTTGGAATGCCCCACAATCTCATCCCAAATGGAGGCGGGGTTCATGGCAACGGCCATGTTAATGGTGCGGTGGGTCCCTGGTTCAGCCATTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60138.p1 GENE.S_Transcript_60138~~S_Transcript_60138.p1 ORF type:complete len:1535 (+),score=390.24,FancD2|PF14631.2|2.9e+02,FancD2|PF14631.2|2.3e-07,FancD2|PF14631.2|7.4e-05,FancD2|PF14631.2|0.00026,MATH|PF00917.22|1.9e+03,MATH|PF00917.22|1.9e-10,MATH|PF00917.22|0.001 S_Transcript_60138:214-4818(+)
MPASPSDACPKWRRTRGPKTTSKRHRPEDDDDNNNNDDDDENDVAPAVEPDEDEDLHPTTTPPNPKTPLNNNRSETEVLSGGAVRVSDFPVAFKRAVNRPHSSVLAIVAAEKGQGQSGNCSGSGGGGGSTGSSNSTSLVQSDRSCWCLFRMSVLNQKPGLNHMQRDSYGRFAGDNKSGDNTSLGWNDYMKMSDFVGDNAGFLVDDTAVFSTSFHVIKEFSSFSKNGGLLGARSGGGGGGSRKSDGHSGKFTWRIDNFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDSVLFSAEVLILKETSIMEEFSENEAESDSNGKKSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSSGTDPDKNFWVRYKMAVVNQKSPAKTVWKESSICTKTWNNSVLQFMKVSDMLEPDAGFLLRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELMDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNSSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGTNEGKKASKSDESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGISNEDVGDATSKGSPKDSGATSPLQSERESGAAEQIEHPLYERLDSVVNESVNSAASTSMRTSASAGASDPDEHEKAVPGQPASPPETSARESSETASLRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQPDLVALVPKLVEHSEHPLAAAALLDRLQRPDAEPALRLPVFGALSQLECSSEVWERVLFQSFALLADSNEEPLAATINFVLKAATQCQHLPEAVRSIRVRLKQLGPEVSPCVLDFLSRTVHSWADVSETILRDIDSDDECGVNCSAVPSGVFFFGENGPPSKIIHSVNEHSFCGSHHFADIFLLMEMLSIPCLAVDATQTFERAVSRAAITAPSLAMVLERRHSQRAAYNTRFLAEGLQPADTVLEGEVNDQLRALQDDFSTLLGLAETLALSRDPRVKGFVKLLYTILFKWYADDSYRARMLKRLVDRATSSTDNTREVDFDMEVLVLLVCEEQEVIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRIREERKAEVSNLVKDKTLLSQKLNDSESANCRLKSEMKAEMDRFVREKKELSEQRQEVESQLDWLRAEREEEIAKLTADKRALQDRLHDAEVQLAQLKSRKRDELKRVVKEKNALAERLKNAEAARNRFDEELKRYATEKVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLARIHEEGLRQIHALQQQRKGSPAGSPLMSPHTLPHTHALFPNTLAHAAPPPPSLAVGMPHNLIPNGGGVHGNGHVNGAVGPWFSHS*

Click here to download the sequence:
Link to NCBI Protein BLAST