Transcript Information: S_Transcript_60253.p1


Annotated TAIR IDAT2G27285.1
Annotated Gene NameCoiled-coil domain-containing protein 55 (DUF2040)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11676079-11677897 | Reverse length=323
E-Value4.1E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7923209292652
Replicate 29.6892963041905
Replicate 310.726339087198
Condition 2: 8 Hour
Replicate 115.250501680798
Replicate 213.74175866001
Replicate 312.081088701933
Condition 3: 24 Hour
Replicate 19.5287770715648
Replicate 27.9356966350415
Replicate 38.2327147909874


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60253.p1 GENE.S_Transcript_60253~~S_Transcript_60253.p1 ORF type:complete len:337 (+),score=119.55,DUF2040|PF09745.5|1.7e-39,DUF2040|PF09745.5|4.9e+03,DUF2040|PF09745.5|8.1e+03 S_Transcript_60253:267-1277(+)
ATGCAAGAGAAGAAGTATGGTTTGCAACTTAGGGTTCCAAAGTCCCAGCAAAAGCAGCAGCAGGTTAGACCTCCGATCCCAAAACCTGCTGGCTTCTGCGACGATGATGATGACGATGTCGAGAAGGAAATTTCTCGGCAGGCTGCCAAGAACAAGTCTATGAAAGATGTTGAGCAGCAACACAAGAAAGCGTTGGAAGAGGACCCGTCTGTGTTTGATTATGATGGAGTGTATGACGATATGAAGGCCGAAATCGCTCAACCTCGAGCTCAGGATCGCCAGCAGCGTCAGCCAAAATACATTCAAGTGCTGATGGAAAAGGCAAAGCAACGTGAACGAGAGCATGAGATTGTTTATGAGAGGAAGCTTGCTAAAGAAAGAAGCAAAGATGACCATCTCTTTGCGGACAAAGACAAGTTTGTGACTAGTGCTTACAAAAGGAAGCTTGCTGAGCAGGCAAAATGGATGGAGGAACAGCGCTTGCGTGAACTTCGTGAAGAAAAGGATGATGTGACAAAGAAGAGTGACCTCACAGATTTCTACTTCAACCTTTCGAAAAATGTTGCTTTTGGAGCTTCAGATAAGACCAAGTCAAAGAAGCCAGAGACGCGGGAAAAGGGGCCAGTTGACACCAGAGAAAACGTGAACAAGCCAGAGAGGCATGAAAAGGAACCGGGTTATTCCAGAGAACAGCTGAAGCCGCGAGAGAGGGGTGAGAAGCAACCAGGTGCTGCTGCAGGAGGGATGGAGCATCCCTCCAGCTCACCTGTGGCCTCAACTTCGAAATTGGGGGATAAACGTCAAGGGGAAGCTTCTGCAATTCCTGAGAGAAGTCCAGATCCAGCTGCAATGCCAGCATCTCATCCTCCAACCTCTGAGAAAGAGAATCCTCCTCCAGGGGAACAACCTCCCAGTGATAAGCCCAAGCGGGATCATCATAAGAAAAGTGAGGATGCTCTTGCAGCCGCTAAAGAACGATTCCTTGCAAGGAAAAAAGCAAAGGTGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60253.p1 GENE.S_Transcript_60253~~S_Transcript_60253.p1 ORF type:complete len:337 (+),score=119.55,DUF2040|PF09745.5|1.7e-39,DUF2040|PF09745.5|4.9e+03,DUF2040|PF09745.5|8.1e+03 S_Transcript_60253:267-1277(+)
MQEKKYGLQLRVPKSQQKQQQVRPPIPKPAGFCDDDDDDVEKEISRQAAKNKSMKDVEQQHKKALEEDPSVFDYDGVYDDMKAEIAQPRAQDRQQRQPKYIQVLMEKAKQREREHEIVYERKLAKERSKDDHLFADKDKFVTSAYKRKLAEQAKWMEEQRLRELREEKDDVTKKSDLTDFYFNLSKNVAFGASDKTKSKKPETREKGPVDTRENVNKPERHEKEPGYSREQLKPRERGEKQPGAAAGGMEHPSSSPVASTSKLGDKRQGEASAIPERSPDPAAMPASHPPTSEKENPPPGEQPPSDKPKRDHHKKSEDALAAAKERFLARKKAKVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST