Transcript Information: S_Transcript_60390.p1


Annotated TAIR IDAT5G58170.1
Annotated Gene NameSHV3-like 5
Annotated Gene Symbol(s)SVL5
Annotation TypeOrtholog
Chromosome Positionchr5:23540261-23543092 | Reverse length=750
E-Value4.9E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.756981107248
Replicate 214.449978056549
Replicate 312.22311545124
Condition 2: 8 Hour
Replicate 15.3035801439745
Replicate 24.3112416649473
Replicate 34.7738617031989
Condition 3: 24 Hour
Replicate 113.567720605486
Replicate 215.905982343296
Replicate 314.680018032665


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60390.p1 GENE.S_Transcript_60390~~S_Transcript_60390.p1 ORF type:complete len:768 (+),score=126.33,GDPD|PF03009.13|3.1e-06,GDPD|PF03009.13|1.8e-24 S_Transcript_60390:3548-5851(+)
ATGATTGGAATGGTTTACAGGGATCATTTTGGGGGGGGGGGGGAAATGATAAAGTATGTGCTGTTTACAACCCTGCTGATAAACTTGGTTACAGCACAAAAGCCTCCAGGGAATCCCCCTCAACCATGGTTAACATTAACTGGGCAACGGCCTGCGGTGATTGCAAGGGGAGGGTTCTCGGGATTGTTTCCAGATTCAAGCCGGTTAGCATATGAGTTTGTGTCACAATTGAGCTTGCAAGATACAATTTTCTATTGTGATCTGCAATTCACCAAGGATGGTGTAGGCTTCTGTCAGTCAGAGTTAAGGCTCGACAATTCAACAAATATAGCCCAACTCTTCCCAGATGGCCAGAAAACCTATAATGTTAATGGCAAAGAAGTCCGTGGATGGCTTGCCCTTGATTATTTTACTGATGCCTTACTAAATAATGTTACCTCTGTAGAGAACATATTGACTAGACCAAATGCATTTGATGGGCAACAGTTACTAACGCTCGAGGATGTGACCGGGATCACTAAACCACCTCCTAGAATCTGGTTAAATGTTCAGTATGATCTGTTCTATAACCAGTACAGGATCAGCCCGGCATTATACCTTCAGGACCTAAGATTTGCAGGAATCAATTACATATCCTCTCCTGAAATCGGCTTTTTGAAAAGCATAGTTGACAAAGTGGACAAGGCCCGGATCAAACTCATCTTAAGGTTCTTAGAGCCTGAAGCAACTGAGCCAACTACTAACCAGACGTATGGAGAGATATTGAAAAACCTTGCAGCCATCAAACCATTTGCTGCGGGCATACTTGTCCCTAAAACATATATATGGCCGGTTACCAAGGACTTGTATTTGTTGCCACCTACCATTCTTGTAACAGATGCCCACAAAGAAGGGCTGGAAGTATATGCATATGCTTTTGCCAATGATTCTCCGGGAAGCTATAACTACAGCTATGACCCATCAGCGGAGTACTTGCAGTTCATTGACAATGGACAGTTTTCTGTTGATGGAGTGCTCACTGACTTCCCTTCTACAGCATCTGAAGCAATTGCCTGCTTGGCACACAACAAAAATGCTAGCAAGCCTCAAAGAAAGACAGCACAGATAATTTCTCACAATGGTGCTAGTGGAGACTATCCTGGATGTACTGATCTTGCATATGAGAAGGCGGTCATGGATGGGGCCGACATAATCGACTGTTCAGTCCAAATGTCAAAGGACGGGGTTGCATTCTGCCTAGACACAGCTGATCTTCTTGGAGATACTAATGCCATCACTCTCTTCATGTCTCGATCCTCTACTGTTCCTGAAATCCAACCGAAGAATGGCATCTTTTCATTCGATCTCACTTGGAGCGAGATTCAAACCTTGAAACCACAACTGGTAGGCCCAATATCACCAGAATCCGGAGGCTTGCCAAGGAATCCAGCAAACAAGAACATGGGTAAATTGTTGACCCTAGCAGAGTTTCTTGACCTTGCCAAGGTCAAGGAAGTGTCTGGAGTTCTAATCAACATACAGAATGCAGCCTACCTTGCTTCAAAGAAAGGTCTAGACATAGTAAATGCTGTCACAACTGCCTTGAGCAATGCTACATTTGACAAACAATCGGCCCAACAAGTTCTTATCCAATCAGATGACACATCAGTACTAGCTGCATTTAAGGATGTTCCAACATATCGGAGAGTATATGATATTCAGAAGGCAATAAGTGAAGCACCCAAACAATCAGTGGACGAAATCAAGAAGTATGCAGACAGTGTTAACATTAGGAGGCCTTCCATATTCAGTACCACAGCCTTCTTCCTCACCAACTTCACCAAAGTTGTTGAGCAGATGCATGCTGGGAATCTCTCAGTGCATGTCTCAACTCTATACAATGAGTACAGCACCCTTGCATTTGATTTCTTCGCAGATCCTATGATAGAATTGGCCACTCTTATTGAGGGAATCAACGTCGATGCAGTTGTGACAGACTATCCAGCTACTGCCAGTGCTTACATTAGGAGTCCATGCTCGGATCCAAGCAATACAAAGATCGAGTACCCCATCGCTCCAGTGGATGCTGGGAGTTTACTGGAGTTAGCTTCACAAGCCCTTCCACCAATAGCAGCACCGGCACCAACTCTTGACCCGGCTGGTGTTGTAGACCCACCTCTACCTCCTGTCACCAAGGCGGAAAACCCTGCTCCTGCCGCACCTGCACCTCAGCAGAAGAATGCAGGCAGTCAGAGGAGCAACACCAGCCTGTGCCTGTCCCTGCTAGCAGCCCTGTTTGTCTACTTGCTTCTGATAGGACACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60390.p1 GENE.S_Transcript_60390~~S_Transcript_60390.p1 ORF type:complete len:768 (+),score=126.33,GDPD|PF03009.13|3.1e-06,GDPD|PF03009.13|1.8e-24 S_Transcript_60390:3548-5851(+)
MIGMVYRDHFGGGGEMIKYVLFTTLLINLVTAQKPPGNPPQPWLTLTGQRPAVIARGGFSGLFPDSSRLAYEFVSQLSLQDTIFYCDLQFTKDGVGFCQSELRLDNSTNIAQLFPDGQKTYNVNGKEVRGWLALDYFTDALLNNVTSVENILTRPNAFDGQQLLTLEDVTGITKPPPRIWLNVQYDLFYNQYRISPALYLQDLRFAGINYISSPEIGFLKSIVDKVDKARIKLILRFLEPEATEPTTNQTYGEILKNLAAIKPFAAGILVPKTYIWPVTKDLYLLPPTILVTDAHKEGLEVYAYAFANDSPGSYNYSYDPSAEYLQFIDNGQFSVDGVLTDFPSTASEAIACLAHNKNASKPQRKTAQIISHNGASGDYPGCTDLAYEKAVMDGADIIDCSVQMSKDGVAFCLDTADLLGDTNAITLFMSRSSTVPEIQPKNGIFSFDLTWSEIQTLKPQLVGPISPESGGLPRNPANKNMGKLLTLAEFLDLAKVKEVSGVLINIQNAAYLASKKGLDIVNAVTTALSNATFDKQSAQQVLIQSDDTSVLAAFKDVPTYRRVYDIQKAISEAPKQSVDEIKKYADSVNIRRPSIFSTTAFFLTNFTKVVEQMHAGNLSVHVSTLYNEYSTLAFDFFADPMIELATLIEGINVDAVVTDYPATASAYIRSPCSDPSNTKIEYPIAPVDAGSLLELASQALPPIAAPAPTLDPAGVVDPPLPPVTKAENPAPAAPAPQQKNAGSQRSNTSLCLSLLAALFVYLLLIGH*

Click here to download the sequence:
Link to NCBI Protein BLAST