Transcript Information: S_Transcript_60471.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8881022676862
Replicate 26.9040021744604
Replicate 37.7785689604302
Condition 2: 8 Hour
Replicate 12.75634296616
Replicate 25.3266306285063
Replicate 33.7701499165273
Condition 3: 24 Hour
Replicate 110.402325471711
Replicate 28.3254818035562
Replicate 35.6620916011485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60471.p1 GENE.S_Transcript_60471~~S_Transcript_60471.p1 ORF type:internal len:147 (-),score=31.18,MatE|PF01554.14|1.6e-15 S_Transcript_60471:2-439(-)
GATCTGCGGGAACCAAGAAAACCAAACAAATTAAAAGAATTCAAAAAGTCTTTGGTGGGTTTTTCACAGATAGAGGTGCAGGAAATCATGACCCCAGATGTGGAAACCCCATTGATACCAGCAAACAGTGAAAAGATCTTGAATCTTAGTGATGACTCAAGAAAATTAGTGATTGTTTTTGATAAAGACGAGATCTTTAGAGAAGCCATGAAGCAGGTGAGATTAGCTGGTCCTTTGATGTCAGTGAACTTCTTGCTGTTCTCATTACAGTTGGTTTCAGTTATGTTTGTTGGTCATCTAGGAGAGTTGCCTCTCTCCGGTGCTTCTATGGCCACTTCTTTAGCCTCTGTCACTGGTTTGAGCTTGATGACAGGGATGGGAAGTGCGTTGGACACATTTTGCGGCCAATCATATGGAGCAAAGCAGTACCACATGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60471.p1 GENE.S_Transcript_60471~~S_Transcript_60471.p1 ORF type:internal len:147 (-),score=31.18,MatE|PF01554.14|1.6e-15 S_Transcript_60471:2-439(-)
DLREPRKPNKLKEFKKSLVGFSQIEVQEIMTPDVETPLIPANSEKILNLSDDSRKLVIVFDKDEIFREAMKQVRLAGPLMSVNFLLFSLQLVSVMFVGHLGELPLSGASMATSLASVTGLSLMTGMGSALDTFCGQSYGAKQYHML

Click here to download the sequence:
Link to NCBI Protein BLAST