Transcript Information: S_Transcript_60474.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value8E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.944022202251
Replicate 210.535894776875
Replicate 317.047540918884
Condition 2: 8 Hour
Replicate 17.9150975881558
Replicate 29.6786011845626
Replicate 36.9037142361287
Condition 3: 24 Hour
Replicate 113.995185404139
Replicate 212.80532143439
Replicate 39.7191329504348


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60474.p1 GENE.S_Transcript_60474~~S_Transcript_60474.p1 ORF type:complete len:423 (+),score=22.59,MatE|PF01554.14|8.2e-28,MatE|PF01554.14|5.1e-29,MatE|PF01554.14|4.4e+03 S_Transcript_60474:445-1713(+)
ATGAACATCATTTTGGGACGGAGAAATATTACCATGAGATTGTCTCGTATAGGATATCTTTGTAAAAAGATACCTCACTTTTTCCTAAAGACAGGGATGGGAAGTGCGTTGGACACATTTTGCGGCCAATCATATGGAGCAAAGCAGTACCACATGCTAGGCATACACATGCAGAGAGCGATGCTTGTTCTTCTCCTATCCAGCGTTCCACTAGCATTCATCTGGGCAAACACGGGTCATATTCTTGCATTCGTAGGACAAGATCCGGAAATAGCAGCTGAAGCAGGGGTGTATGCTCGGTACTTGATTCCGAGCATATTTGCATACGGTCTCCTCCAATGTCATATCAAATTCCTTCAAGCACAAAACATCGTAGTCCCCATGATGGTAACTGCTGGATTCACGACTCTGCTGCATATAGTTATTTGTTGGGTCTTGGTGTTTGAGTGCGGATTAGGGACGAGAGGGGCTGCCGTTTCAACTGCCATCTCTTATTGGGTCAATCTTTTGTTGTTGGCTATATATGTAAGGCTGTCTCCTTCTTGCAGAGAAACTTGGACAGGTTTCTCAATGGAGGCCTTCCGTGAGATCCCAGTGTTTCTTAAACTTGCTATCCCTTCTGCTATAATGATATGCTTGGAAATATGGTCGTTTGAGATGACGGTTCTATTAGCTGGACTTCTACCAAATCCAAAGGTTGAAGCATCTGTTCTATCAATCAGCCTTAATACCTGTTCAATGATATACATGATGCCACTTGGTTTAGGAGCAGCAGTAAGCACCCGAGTTTCCAATGAGCTTGGCGCTGGTCGACCACAGATAGCTCGCCTGGCAGCACGTGTTTCCCTGTTGATGGTTGGTATGGAAGGGATTACAACGGGCTGTATATTGGTATTGGGGCACAATTATTGGGGTTACTGCTACAGCAAAGATGAAGAGATAGTGAAACATGTTGGGCAAATGTTACTTCTACTTGCTTGTTCGCATGTGTTTGAGGGCATTCAGACTGTGCTTTCCGGCACTGCTAGAGGATGTGGTTGGCAAAAGATCGGAGCAATAGTCAATCTGGGAGCTTATTACTTGGTAGGGATTCCATGTGCTTTCGTGCTAGCGTTTGTGTGTCACATTGGAGGAAAGGGATTGTGGATGGGAATTATAGCAGCCTTAGTAGTCCAATCATTCTGTCTCTTTATCATAGTTCTGCGCACTGATTGGGATCAACAAGTAGACAATGCCACAGATAGGGTGCACCATGTGATAATCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60474.p1 GENE.S_Transcript_60474~~S_Transcript_60474.p1 ORF type:complete len:423 (+),score=22.59,MatE|PF01554.14|8.2e-28,MatE|PF01554.14|5.1e-29,MatE|PF01554.14|4.4e+03 S_Transcript_60474:445-1713(+)
MNIILGRRNITMRLSRIGYLCKKIPHFFLKTGMGSALDTFCGQSYGAKQYHMLGIHMQRAMLVLLLSSVPLAFIWANTGHILAFVGQDPEIAAEAGVYARYLIPSIFAYGLLQCHIKFLQAQNIVVPMMVTAGFTTLLHIVICWVLVFECGLGTRGAAVSTAISYWVNLLLLAIYVRLSPSCRETWTGFSMEAFREIPVFLKLAIPSAIMICLEIWSFEMTVLLAGLLPNPKVEASVLSISLNTCSMIYMMPLGLGAAVSTRVSNELGAGRPQIARLAARVSLLMVGMEGITTGCILVLGHNYWGYCYSKDEEIVKHVGQMLLLLACSHVFEGIQTVLSGTARGCGWQKIGAIVNLGAYYLVGIPCAFVLAFVCHIGGKGLWMGIIAALVVQSFCLFIIVLRTDWDQQVDNATDRVHHVIIY*

Click here to download the sequence:
Link to NCBI Protein BLAST