Transcript Information: S_Transcript_60475.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value3E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.541392387698
Replicate 220.809730515709
Replicate 311.334987897223
Condition 2: 8 Hour
Replicate 15.4070462264536
Replicate 24.6740373425798
Replicate 33.6751461387899
Condition 3: 24 Hour
Replicate 126.497444883114
Replicate 222.893667677527
Replicate 326.552213075568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60475.p1 GENE.S_Transcript_60475~~S_Transcript_60475.p1 ORF type:complete len:493 (+),score=53.18,MatE|PF01554.14|2.1e-37,MatE|PF01554.14|7.1e-29,MatE|PF01554.14|6.5e+03 S_Transcript_60475:122-1600(+)
ATGGATGTGCAGGAAGTCATGAACCCAGATGTGGAAACCCCATTGATACCAGCAAACAGTGAAAAGATCTTGAATCTTAGTGATGACTCAAGAAAATTAGTGATTGTTTTAGATAAAGATGAAATCTTTAGAGAAGCCATGAAGCAGATGAGATTAGCTGGTCCTTTGATGTCAGTGAACTTCTTGCTGTTCTCATTACAGCTGGTTTCAGTTATGTTTGTTGGTCATCTAGGAGAGTTGCCTCTCTCCGGTGCTTCTATGGCCACTTCTTTAGCCTCTGTCACTGGTTTGAGCTTGATGACAGGGATGGGAAGTGCGTTGGACACATTTTGCGGCCAATCATATGGAGCAAAGCAGTACCACATGCTAGGCATACACATGCAGAGAGCGATGCTTGTTCTTCTCCTATCCAGCGTTCCACTAGCATTCATCTGGGCAAACACGGGTCATATTCTTGCATTCGTAGGACAAGATCCGGAAATAGCAGCTGAAGCAGGGGTGTATGCTCGGTACTTGATTCCGAGCATATTTGCATACGGTCTCCTCCAATGTCATATCAAATTCCTTCAAGCACAAAACATCGTAGTCCCCATGATGGTAACTGCTGGATTCACGACTCTGCTGCATATAGTTATTTGTTGGGTCTTGGTGTTTGAGTGCGGATTAGGGACGAGAGGGGCTGCCGTTTCAACTGCCATCTCTTATTGGGTCAATCTTTTGTTGTTGGCTATATATGTAAGGCTGTCTCCTTCTTGCAGAGAAACTTGGACAGGTTTCTCAATGGAGGCCTTCCGTGAGATCCCAGTGTTTCTTAAACTTGCTATCCCTTCTGCTATAATGATATGCTTGGAAATATGGTCGTTTGAGATGACGGTTCTATTAGCTGGACTTCTACCAAATCCAAAGGTTGAAGCATCTGTTCTATCAATCAGCCTTAATACCTGTTCAATGATATACATGATGCCACTTGGTTTAGGAGCAGCAGTAAGCACCCGAGTTTCCAATGAGCTTGGCGCTGGTCGACCACAGATAGCTCGCCTGGCAGCACGTGTTTCCCTGTTGATGGTTGGTATGGAAGGGATTACAACGGGCTGTATATTGGTATTGGGGCACAATTATTGGGGTTACTGCTACAGCAAAGATGAAGAGATAGTGAAACATGTTGGGCAAATGTTACTTCTACTTGCTTGTTCGCATGTGTTTGAGGGCATTCAGACTGTGCTTTCCGGCACTGCTAGAGGATGTGGTTGGCAAAAGATCGGAGCAATAGTCAATCTGGGAGCTTATTACTTGGTAGGGATTCCATGTGCTTTCGTGCTAGCGTTTGTGTGTCACATTGGAGGAAAGGGATTGTGGATGGGAATTATAGCAGCCTTAGTAGTCCAATCATTCTGTCTCTTTATCATAGTTCTGCGCACTGATTGGGATCAACAAGTAGACAATGCCACAGATAGGGTGCACCATGTGATAATCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60475.p1 GENE.S_Transcript_60475~~S_Transcript_60475.p1 ORF type:complete len:493 (+),score=53.18,MatE|PF01554.14|2.1e-37,MatE|PF01554.14|7.1e-29,MatE|PF01554.14|6.5e+03 S_Transcript_60475:122-1600(+)
MDVQEVMNPDVETPLIPANSEKILNLSDDSRKLVIVLDKDEIFREAMKQMRLAGPLMSVNFLLFSLQLVSVMFVGHLGELPLSGASMATSLASVTGLSLMTGMGSALDTFCGQSYGAKQYHMLGIHMQRAMLVLLLSSVPLAFIWANTGHILAFVGQDPEIAAEAGVYARYLIPSIFAYGLLQCHIKFLQAQNIVVPMMVTAGFTTLLHIVICWVLVFECGLGTRGAAVSTAISYWVNLLLLAIYVRLSPSCRETWTGFSMEAFREIPVFLKLAIPSAIMICLEIWSFEMTVLLAGLLPNPKVEASVLSISLNTCSMIYMMPLGLGAAVSTRVSNELGAGRPQIARLAARVSLLMVGMEGITTGCILVLGHNYWGYCYSKDEEIVKHVGQMLLLLACSHVFEGIQTVLSGTARGCGWQKIGAIVNLGAYYLVGIPCAFVLAFVCHIGGKGLWMGIIAALVVQSFCLFIIVLRTDWDQQVDNATDRVHHVIIY*

Click here to download the sequence:
Link to NCBI Protein BLAST