Transcript Information: S_Transcript_60517.p1


Annotated TAIR IDAT1G48900.1
Annotated Gene NameSignal recognition particle, SRP54 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18084972-18087743 | Reverse length=495
E-Value5.2E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.939687018378
Replicate 224.54271551553
Replicate 324.089930465788
Condition 2: 8 Hour
Replicate 130.41761099498
Replicate 232.864072226575
Replicate 333.047825744157
Condition 3: 24 Hour
Replicate 129.719201958134
Replicate 225.73835965841
Replicate 321.99596895795


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60517.p1 GENE.S_Transcript_60517~~S_Transcript_60517.p1 ORF type:3prime_partial len:258 (+),score=67.72,SRP54|PF00448.18|2.2e-62,SRP54_N|PF02881.15|6.5e-17,cobW|PF02492.15|3.3e-07 S_Transcript_60517:263-1033(+)
ATGGTGTTAGCACAATTAGGGGGGAGCATATCCCGTGCTCTCCAACAGATGAGCAATGCGACGATCATCGATGAGAAAGTCCTGAATGAATGTCTGAATGAGATCACTCGTGCTCTTTTACAATCTGATGTCCAATTTAAGCTTGTTAGGGATATGTCTACTAACATCAAGAAGATCGTTAATCTTGATGATCTTGCTGCTGGTCATAACAAGCGCAGAATCATTCAACAGGCTGTTTTTAATGAGCTTTGCAAAATGTTGGATGCTGGGAAGCCATCTTTTACTCCAAAGAAGGGGAAACCAAGTATTGTCATGTTTGTTGGTCTACAAGGGTCTGGTAAGACTACAACCTGTACAAAATATGCCTATTATCATCAGAAGAAGGGCTGGAAACCAGCTTTGGTCTGTGCTGACACATTTAGAGCTGGTGCTTTTGATCAATTGAAGCAGAATGCAACTAAAGCTAAGATTCCCTTTTATGGAAGCTACATGGAATCAGACCCTGTGAAGATTGCTGTAGAAGGTGTGGAAAGATTCAAAAAAGAAAATTGTGATCTCATTATCATTGATACCAGTGGTCGCCACAAACAAGAGGCTGCTCTTTTTGAGGAAATGCGGCAAGTTTCTGAGGCTACGAAACCAGATCTTGTCATATTTGTTATGGACAGTAGCATTGGTCAAGCTGCATTTGATCAGGCTCAAGCGTTTAAGCAAAGTGTTGCTGTTGGGGCTGTGATTATTACTAAAATGGATGGTCATGCAAATGGAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60517.p1 GENE.S_Transcript_60517~~S_Transcript_60517.p1 ORF type:3prime_partial len:258 (+),score=67.72,SRP54|PF00448.18|2.2e-62,SRP54_N|PF02881.15|6.5e-17,cobW|PF02492.15|3.3e-07 S_Transcript_60517:263-1033(+)
MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMSTNIKKIVNLDDLAAGHNKRRIIQQAVFNELCKMLDAGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIIDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHANGG

Click here to download the sequence:
Link to NCBI Protein BLAST