Transcript Information: S_Transcript_60552.p1


Annotated TAIR IDAT5G65540.1
Annotated Gene Nameunknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26195710-26198112 | Forward length=605
E-Value1.5E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.359881449146
Replicate 220.306547602688
Replicate 320.614268856297
Condition 2: 8 Hour
Replicate 131.439920384629
Replicate 228.604801494576
Replicate 324.603366389829
Condition 3: 24 Hour
Replicate 118.511999110603
Replicate 217.852919566774
Replicate 318.780593595186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60552.p1 GENE.S_Transcript_60552~~S_Transcript_60552.p1 ORF type:complete len:603 (+),score=109.08,Bromo_TP|PF07524.9|1.5e-05 S_Transcript_60552:157-1809(+)
ATGGCAGTGTTAGGAGAGGATGGGAAACGGTACGAGCTAGCAAGAAAGCTTGAATCATGTGGGGTATGGCGATGGTGGCTTGGCGAATCTCTTTATTCCAATTTTGCCCCTTCCCTCTCTTCGTCATCTTCTTGGGACTCTTTCATGTCAGTTGACGACTCCAAGTCCAAGTCCAAGTCCAAGTCCCAGATCCAACTTCAGCTCCGTGTTCGTGCTCTCCTTTTCGACAAGGCTGCTTCTATCTCCTCTTCTTCCCTCTCCAACCTCAATCCCTCTTATTTGCAATTGCACGGCGACGATGTTTACTTCACCCTTGAAGATGGTGTCTCTCAGCCTCAGCGTGATCCTCCCCCTTCTAAGATTCAATCCCAGAAAGGAAGACAGGAAGATTTTCCTGAAACTTGGTATAGCCAGTTTATTGAAAGCTACAGAGCTAAAAAGCCTTACCTAGTCAGTCGAGACATTCGAGAGCCAGACAGACGGAACCCTTCTGAGATGTCCAATTATCTGAAGCTTTTGGAGAGGCATAAGAGGAGACGGATAGAGTTCAAGGAGGGTGAGTATGGAGGATTTTGTGATGCAAATTCTGGTGATGATAACGCATGTTTCTTCCCAGAAACAATGTTCACGATGAATTGTGTTCCCGATTGTGCGATTGCACCGAGAACGGTTGCGGAGGGGAAACCAAAAGTTGAATTTTTTGGAGTTCTTGATACGTTACCACAAGTTGCAACTAAGAGCTCTATCATGCTAGAAAGGCTTGGTATCAGGCCTGAATATCTGGAGCAGGGGCCTGGCAAATCCCGCACAAAAGTCGGCTTGGATGGAAATAAAAATCATGTGAGTGAGGAGGAAGCATTGCAGATGTCTAAGAAGGTAGTTGCGCATGCTTTAAAAACTGTGGGCTTCGAAGGTGCCTTTGAAATACCTATTGAGGTCCTGTCCCAGTTTCTTAGTTGCCATGTCTCGAAACTAGGCCGCATGCTCAAAGTCCTCGCCGATAGTTATAGAAAACAGTGTTCAGCTATGGAACTGATTAAAATGTTCCTCCAAGCAGCGGGAAACAGTAACCTTGCCGCTTTAGCAGACCATGTAAAGGATAGCAGGAATGTTGTGCAGAAAAGTCCTCAGCAGAGTCATAACCTGCAGCCTCAGCTGCCTTTGCCGCAACAAATTGCCCTTCAGCATCCCCAACAAATTCCTCGACAAATGCATCCACAGATGCCGCAGATGGTTCACCCCCCAAATCTAACCTTACAGCATCAACAGCATCTGGAGAGAATGAGGCGGCGGCAAGCATCTTCTCCTCGCCCTGTCATGAGTATGGACAAGGATCGACCCATGGTTGAGGTTAAACTTGAGAACCTGTCCGACTTACCCATGGACAATAACACCTTTAGTGCGATCAACAGCAGACAAGCCAAGATGCAATGGCAGCAGCAGCAGATCGCTGCAATCCAGAGGATCATGGGACCGTCTGCGAACCAAATGAGACAAGCAGCTTCTGTGCAGATGCCCTCAATGCAATCACAGAATATCAATGCTGTTAGGGCACCTCCAGTCAAGGTGGAAGGTTTTCAAGAATTAATGGGTGGAGATTCTTCAATGAAGCAAAATTCAGATGAGAGTAGGCTGACTTCCCCTTCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60552.p1 GENE.S_Transcript_60552~~S_Transcript_60552.p1 ORF type:complete len:603 (+),score=109.08,Bromo_TP|PF07524.9|1.5e-05 S_Transcript_60552:157-1809(+)
MAVLGEDGKRYELARKLESCGVWRWWLGESLYSNFAPSLSSSSSWDSFMSVDDSKSKSKSKSQIQLQLRVRALLFDKAASISSSSLSNLNPSYLQLHGDDVYFTLEDGVSQPQRDPPPSKIQSQKGRQEDFPETWYSQFIESYRAKKPYLVSRDIREPDRRNPSEMSNYLKLLERHKRRRIEFKEGEYGGFCDANSGDDNACFFPETMFTMNCVPDCAIAPRTVAEGKPKVEFFGVLDTLPQVATKSSIMLERLGIRPEYLEQGPGKSRTKVGLDGNKNHVSEEEALQMSKKVVAHALKTVGFEGAFEIPIEVLSQFLSCHVSKLGRMLKVLADSYRKQCSAMELIKMFLQAAGNSNLAALADHVKDSRNVVQKSPQQSHNLQPQLPLPQQIALQHPQQIPRQMHPQMPQMVHPPNLTLQHQQHLERMRRRQASSPRPVMSMDKDRPMVEVKLENLSDLPMDNNTFSAINSRQAKMQWQQQQIAAIQRIMGPSANQMRQAASVQMPSMQSQNINAVRAPPVKVEGFQELMGGDSSMKQNSDESRLTSPSK*

Click here to download the sequence:
Link to NCBI Protein BLAST