Transcript Information: S_Transcript_60620.p1


Annotated TAIR IDAT4G02980.1
Annotated Gene Nameendoplasmic reticulum auxin binding protein 1
Annotated Gene Symbol(s)ABP1, ABP
Annotation TypeOrtholog
Chromosome Positionchr4:1319902-1321449 | Reverse length=198
E-Value2.2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43988431793687
Replicate 21.4586968302489
Replicate 30.76209653238019
Condition 2: 8 Hour
Replicate 11.7624289518292
Replicate 21.479130488577
Replicate 31.4093122383459
Condition 3: 24 Hour
Replicate 11.4442898175599
Replicate 21.4984338232296
Replicate 31.6675731838093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60620.p1 GENE.S_Transcript_60620~~S_Transcript_60620.p1 ORF type:3prime_partial len:121 (+),score=20.31,Auxin_BP|PF02041.12|2e-56 S_Transcript_60620:186-545(+)
ATGGCCACATCGGCAACAACAACATCATCCCGGAGTTTCCCACCTTGCTCAGGCTTTTCACTTGTGAGGAATATAAGTGAGCTTCCGCAAAGTAACTATGGTATTGAAGGCCTCTCTCACATCACCCTTGCAGGGTCCGTTTTACATGGAATGAAAGAGATTGAGGTGTGGCTTCAAACAATTTCTGCTGGCTCACAAACACCGATCCATAGGCATTCATGTGAAGAAGTGTTTGTTGTTCTGAAGGGTAGCGGCACGCTTTATCTTGCTGCAGATTCAAATGGAAAATACCCTGGAAACCCTCAAGGATTTCCCATCTTCACAAATAGCACTTTCAGTGTCCCAGTTAATGATGCTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60620.p1 GENE.S_Transcript_60620~~S_Transcript_60620.p1 ORF type:3prime_partial len:121 (+),score=20.31,Auxin_BP|PF02041.12|2e-56 S_Transcript_60620:186-545(+)
MATSATTTSSRSFPPCSGFSLVRNISELPQSNYGIEGLSHITLAGSVLHGMKEIEVWLQTISAGSQTPIHRHSCEEVFVVLKGSGTLYLAADSNGKYPGNPQGFPIFTNSTFSVPVNDAH

Click here to download the sequence:
Link to NCBI Protein BLAST