Transcript Information: S_Transcript_60625.p1


Annotated TAIR IDAT4G02980.1
Annotated Gene Nameendoplasmic reticulum auxin binding protein 1
Annotated Gene Symbol(s)ABP1, ABP
Annotation TypeOrtholog
Chromosome Positionchr4:1319902-1321449 | Reverse length=198
E-Value3.4E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8018573193115
Replicate 25.3338612117069
Replicate 32.9386777276067
Condition 2: 8 Hour
Replicate 14.4525540222585
Replicate 24.9168898109289
Replicate 34.5676816296389
Condition 3: 24 Hour
Replicate 13.4807781386112
Replicate 22.3660023074209
Replicate 33.3259838775977


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60625.p1 GENE.S_Transcript_60625~~S_Transcript_60625.p1 ORF type:complete len:182 (+),score=35.55,Auxin_BP|PF02041.12|8.5e-75,Cupin_2|PF07883.7|2.8e-06 S_Transcript_60625:309-854(+)
ATGGCTCGGCTCAGACCGAGCTATTTGCCTCTCGTTGATAGGAGTATTTTAATCCTCGCTTGGCTTTTCTTCTCATCATCAACCTTGCCTTTTGTTGTGGCTTCCAAATGCTCCATCACTGGCTTTCCGCTTGTGAGGAATATAAGTGAGCTTCCACAAAGCAACTATGATAGAGAAGGCCTTTCTCACATCACCCTTGCAGGGTCCCTCTTACATGGAATGAGAGAGATAGAAGTGTGGCTTCAAACATTTTCTGCTGGATCACACACACCAATCCATAGGCATTCATGTGAAGAAGTGTTTGTTGTTCTGAAGGGTAGCGGCACGCTTTATCTTGCTGCAGATTCAAATGGAAAATACCCTGGAAACCCTCAAGGATTTCCCATCTTCACAAATAGCACTTTCAGTGTCCCAGTTAATGATGCTCACCAAGTCTGGAACACTGATGAAGCTGAAGATTTGCAAGTGTTGGTTATCATATCTCGTCCTCCTGTCAAAGTATTCATTATGATGACTGGTTTATGCCTCACACTGCAGCCAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60625.p1 GENE.S_Transcript_60625~~S_Transcript_60625.p1 ORF type:complete len:182 (+),score=35.55,Auxin_BP|PF02041.12|8.5e-75,Cupin_2|PF07883.7|2.8e-06 S_Transcript_60625:309-854(+)
MARLRPSYLPLVDRSILILAWLFFSSSTLPFVVASKCSITGFPLVRNISELPQSNYDREGLSHITLAGSLLHGMREIEVWLQTFSAGSHTPIHRHSCEEVFVVLKGSGTLYLAADSNGKYPGNPQGFPIFTNSTFSVPVNDAHQVWNTDEAEDLQVLVIISRPPVKVFIMMTGLCLTLQPS*

Click here to download the sequence:
Link to NCBI Protein BLAST