Transcript Information: S_Transcript_60716.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value8.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.024218022013
Replicate 227.285618058962
Replicate 326.236016154326
Condition 2: 8 Hour
Replicate 141.895899561093
Replicate 236.725468342206
Replicate 339.660681052631
Condition 3: 24 Hour
Replicate 130.979137870511
Replicate 228.931458583081
Replicate 325.110442438722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60716.p1 GENE.S_Transcript_60716~~S_Transcript_60716.p1 ORF type:complete len:452 (+),score=60.63 S_Transcript_60716:151-1506(+)
ATGGCGACTCTCTCAGCTTGGCCAAACAATCCCCCAAACCCTAACCCAATTTCCTCCCCCAATTTCCTCCACCACAATCACCAACCTCCTTCCCCTCCTGCAATGGCCTCACAAGAATCATCATCAGATCACCTCTACTTCGACACCACCGCCAATTCCGACGCCGATTCCGACACTTCTCTACCTTCTCTCCCCAAAATCAACGTCTCCCCTCAAAAATCCAACCCCAACCCTCTCCCAAACCCCAACCCTAACCTTAACCCTGATTCCCCCAATTCCACCCCCTCACATCAATCCTCCAGCCTCCTCCACGTGTCCTTCAACCAAGACCACGGCTGCTTCTCTTCCGGCACCGATCGAGGCTTCCGAATCTACAACTGCGATCCTTTCCGAGAAATCTTTCGCCGGGACTTCGACCGAGGCGGTGGCATCGGAAAAGTCGAAATGCTTTTCCGGTGCAATATTCTAGCCCTAGTCGGTGGTGGCTCCGAGCCGCAGTACCCGGTCAACAAGGTCATGATATGGGACGACCACCAGAGCCGGTGCATCGGAGAGCTCTCGTTCCGCTCTGAAGTCCGTGGCGTTCGCCTTCGCCGTGATCGGATCGTGGTCGTGTTGGAGCAGAAGGTGTTTGTCTACAATTTCACCGACTTGAAGCTGCTTCATCAGATCGAGACAATCGCAAACCCTAGGGGTTTGTGTGAGGTTTCGCAGTCGGCCGGGAAGATGGTGCTGGTTTGCCCTGGGTTGCAGAAGGGCCAGGTTAGGGTTGAGCATTACGCGTCCAAGAGGACTAAGTTCGTTATGGCTCATGATTCGAGGATCGCCTGCTTTGCTTTGACTCAGGATGGCGGGTTGCTTGCTACCGCTAGCTCCAAGGGGACGCTTGTTCGGGTTTTTAATACTTATGATGGTTCATTGTTGCAGGAGGTAAGACGAGGTGCAGACAGAGCAGAGATTTATAGCTTGGCTTTCTCTACAACTGCTCAGTGGCTAGCAGTCTCAAGTGACAAGGGCACTGTACATGTTTTCAGCTTGAAGGTCAATTCAGGATTACCAGCTAATGAAAATGTTCAAGCTTCTTCTGATAACAGTGCTGCCACTGCAGCAGCTGGATCATCTCTTTCTTTTATTAAAGGAGTTCTGCCCAGATATTTCAGTTCAGAATGGTCCGTTGCTCAATTCCGTTTGATTGAAGGGGCACAATATATTGTTGCTTTTGGGCATCAGAAGAATACAGTGGTAATCCTTGGTATGGATGGAAGCTTCTATCGATGCCAATTTGATCCTGTGAAAGGTGGGGAGATGACTCAACTGGAATATCACAACTTTCTGAAGCCTGAGGAACCTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60716.p1 GENE.S_Transcript_60716~~S_Transcript_60716.p1 ORF type:complete len:452 (+),score=60.63 S_Transcript_60716:151-1506(+)
MATLSAWPNNPPNPNPISSPNFLHHNHQPPSPPAMASQESSSDHLYFDTTANSDADSDTSLPSLPKINVSPQKSNPNPLPNPNPNLNPDSPNSTPSHQSSSLLHVSFNQDHGCFSSGTDRGFRIYNCDPFREIFRRDFDRGGGIGKVEMLFRCNILALVGGGSEPQYPVNKVMIWDDHQSRCIGELSFRSEVRGVRLRRDRIVVVLEQKVFVYNFTDLKLLHQIETIANPRGLCEVSQSAGKMVLVCPGLQKGQVRVEHYASKRTKFVMAHDSRIACFALTQDGGLLATASSKGTLVRVFNTYDGSLLQEVRRGADRAEIYSLAFSTTAQWLAVSSDKGTVHVFSLKVNSGLPANENVQASSDNSAATAAAGSSLSFIKGVLPRYFSSEWSVAQFRLIEGAQYIVAFGHQKNTVVILGMDGSFYRCQFDPVKGGEMTQLEYHNFLKPEEPF*

Click here to download the sequence:
Link to NCBI Protein BLAST