Transcript Information: S_Transcript_60812.p1


Annotated TAIR IDAT1G11240.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3766936-3768212 | Reverse length=200
E-Value6.7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.242368657742
Replicate 218.573266719336
Replicate 319.101405229443
Condition 2: 8 Hour
Replicate 118.60531502158
Replicate 222.25770655483
Replicate 314.029307862462
Condition 3: 24 Hour
Replicate 119.504360259459
Replicate 218.038543907705
Replicate 318.916533303837


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_60812.p1 GENE.S_Transcript_60812~~S_Transcript_60812.p1 ORF type:internal len:196 (-),score=66.56,Nop25|PF09805.5|2.4e-12 S_Transcript_60812:2-586(-)
GTGAGAATGGAAGCAGGCCCGGAAGCCCTCGTAGTGGGTCAGCCAAGCGCAAACCACATCAAGAAGAGGTCTCTTAGAAACAAAGCTCTTTCCATCTCTTTCAACGAGAAAGATCTGAAGGACTATGTGGGTGGTTTCCACAAGAGGAAGAAGAAGAGGAGAAAGGAAGCCCAGAAGCAGCAAGAAGAAGCAGAACGACGTAGGCGTCTGGAAGAGCGTAAAAGGAGGAGATTGGAAAAAGAGTATGCATTAAATGGTGGTGCTCCACCTGCAAATGATGCTGAACCCAATGGTGAGGATCTGGAGGAGGAGAAGCCCAAACCATCAATTTCTGGAAAAACAACGTATGAAAATGGCAATGTTATGGTCACCGTTACTACAAGTGAGATCACTGCTGAAGAAGTGGAGCATCCAAGTGAAAAGTCAGCACCATTACTGCCGGTGTCAAATGGAGAGGCCAAGAAAAAGCATAATATTCCCGTGAGCAAGAAAAAGCCCTTCAAAAAAGCAACAAAAGGTAGATCACGTCCAAAGCTACACAGCAAAAGAGACAGAAGGAAAGGGAAGAAAAATAGCAGAGGGCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_60812.p1 GENE.S_Transcript_60812~~S_Transcript_60812.p1 ORF type:internal len:196 (-),score=66.56,Nop25|PF09805.5|2.4e-12 S_Transcript_60812:2-586(-)
VRMEAGPEALVVGQPSANHIKKRSLRNKALSISFNEKDLKDYVGGFHKRKKKRRKEAQKQQEEAERRRRLEERKRRRLEKEYALNGGAPPANDAEPNGEDLEEEKPKPSISGKTTYENGNVMVTVTTSEITAEEVEHPSEKSAPLLPVSNGEAKKKHNIPVSKKKPFKKATKGRSRPKLHSKRDRRKGKKNSRGH

Click here to download the sequence:
Link to NCBI Protein BLAST